Ll_transcript_274545

• Id Trinity: FTRINITY_DN54249_c4_g1_i2
• Name Transcript: Ll_transcript_274545
• Sequence: CAAATATATCAGATAGCAGATAGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGCGTGAAAATGTTGCAACCG CACTCCTGTTCTGCTACAACAAAATCTTCCATTACTATCCCAAACGACGCTTTCACTCCAAAGTTCATTCCTTTAAGGCGTTATTCTTCTTCTTCTTGTA TACCCACTTTTTCGTTTACCCTCCAACCACTCTCTATCACATGCCGCCACTCTAACCTCTATGAACCTAAATCATTTCCCTCTTCTCCACAAGCTCAACG CTATTCAGCACAACCAGCTTCAGTTGGAACTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAA TCTCCGGAATTTCAATCATTGGAATCCGGGGCATTCAAAGTATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTTGCGTCAATATG ATTGGAACAGAAAACAGGTGTTCTCGCTATCAGTGAGTGAATTGGGAACTCTAATTAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCAAA TCAGGGAAGAAGTGATGAAGGTAAAATTAGAAAAGTTTTGAAGGTGGAGCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAGAACAAG CTTGACAACATCGACGAAAATATCTTCATTCCTATTACAAAGGCAGAGTTGGCGGTTCTCAGCTCACTTTTCAATTTTATCATGCCATACCTTCTAGGTT GGCATACTTTTGGAAACTCTATAAAGCCAGATAATTCCAGCAAAGTGAATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATAGATAGA TAGATAGATAGGGATCAATCACTTTTGCTTCTAATCACTTCATGGTGTTATCAAGTGTAGAATATGTAGTGGGATCAATCACTTCAAGAGACAGTCAACA TTTAGCACATCATGTTTCTTCTAATTGTCAATGGAGATGAAGTGTTGTATTTATAGTACACAAATATAAAGTTGTGTCCATTGAACCTAGTCAGGATGTT AGTAAGGAGAGTGAAGATAGTCCCTTCTTGCATTTGCTGCTCTTAATTAATCATCAAAACTTCACACAAGTGCAGTCATTTTCATGCATATTCATATATA GTCTGCTTTGTTAATATGCATAATAGTATATTGTGTATTTAGGAGTGTTGCCGTAAATAAAAAATGTAGTAGTAACTATTTCTAAAACCAAAAACTCAAT GGTATGGATATATAAAATACACTAAATATAATCCTACACAATTTAGTAATTGTCCTTACTTTTGTTTATAGGAGTTATTTTCATCTCAAAAAAATGTCAC TAAGACTATTCATGAAATAGATGTTTTTGCAGTAATATTTTGTCCTTTAATTATACTTGCCTCCAAGTTTGTAGTATATGATAAATGTTACTGTCTTGGG TAATTTGGAAAACCATGAAGTATTCTAATGTTCTAATAAAGTAATAGTTAGAAGGTGTTATTCAATAATGTTATTAGTTCATAGTTTGGTTTGTGAATCT GATGATACTTTTTTTATTAGTCACTATTTTAAGCATGTCATTAACACTTGATCTGTACTTCTTATAAGATAAATAAATATTTGAAGAAGTAGATGAACCT GGACATAACATTGGTCCATAGTGAGAATTGAAGAATATTGTGAAGTTGCAGGACATCTGATCATATCGATTGCCCACATGCCTCTCTGCATGTTTCCCAA AGTCTTCAGTTTCAACTTTAAAGTTATTTATCCTTTTCTGCTTTTCTGATACATACTCACAACTCACAACTCACACCTCATATATATGGAATCTAGCTAG TACCTCATTCTATGTACACACAATGTTGTGTACATAGAATGCTACACTGCTTTACTTATTTTATTTTTATACTTGTTTTACCTATAATTGCTGCACATGA TTTATTAGTTTTTTGTTTTGAATTATAAAATTCATGGCTATGAAAATGACTAAAAGGGTTTGAGAAGTGATGATTTGAATCACTTTAAGAGCAAGAAATG CAATAAGGGACTTTCTTCACTCTCCTTATCAAACATCCGGACCAGGTTCAGGAGACAGAAACTAAGGTTTCTCTGACATATATGACTGTACTATATATAA ATAGAACAGTTGATGTGCATTTGTTGAGCATGACAACTCAGGAGTTAATTGTTGGCTGTCTCTTGAAGTTCCTATGAGCACTTCACACATGTGTATCACT ACTCTAATTAGAAAGAGTTAAGAGTGGTGTGAAGTGTTTGGAGGAACTTCAAGATTCATCTAACACTGATTACCAAGATTCAACTAACAAATGCAATAAG GGTTCAACTCTATGGTTCTGCATTGTCATTTTACATTTCACACTCGATTTATTACTTTTGTTCGTTACAATATAGTATAAGATTGATGTAAATAATATAT CCTTAAAATTATTAATGTATTTTGTAATTAACTAAAAATAATAAAAAAATGTTGAGTTGTATACAGAATTTGATTAGTGTTAATGTAATTTAGTGTTACT GAAATAATAATAGTATGATGAGGTATTTGATGGTAGAGGGTAAGGCCCTAAGCGAGCCCATGGGCTTAGATTAAGCAGCAAATGAGGGTGATGTGTATGT AGGTTAACATCCTTCATTCAGAGAGAGACTCAGAGAGAGAGAGACACACAGAGAGAGACACACAGAGAGAGACACAGAGAGAGACACAGACACAGAGAGA GAGAGAGAGAGAGAATGTTTGGGCGACGCAAGTTTCTTTCCTTTCCCTTAGTCATCGGGGCAGTGATCATTGGTGTTGTCTCTGGGAAAGCAATATTTGG AGCCCCACTTGAGGAGTATTGGAAAAAGAAGCATCAGGAAGAAGAAGCTGAAGCTGCTGCTGCAAAGGATAATCACTCATCTTCATCTTAGGACTATTTC CTTCAATTGCATTATGCTCCAACTACTGTAACCATATTACAATTATGTTTTGCTTATTACTGTAAAATGCTCATTTTAATAATCAAATAATATTAAAACA ACCTACACAATAGAGATAATCATATGTACATCAAAATTATTTCTTTTAAGATAATCATACGTTCAATAGAGATGGGATTGTTAACACCAAATATGTTTTA TACAGCAAGTAGTTTAAAAATAGGGGTATTCACATCAAAGGTCAAACAAAAATAAATAATTGCAAACTGCAAAAAACTATATCTGAAAACTAATCTAAAA TGAATTACATTGTTATACATTATTACATTTCACCAAATGAATTATTTTTGCTGATAAAAAATAAAACAATTGAGTAGTAAATAATGTATTAGTTTTATTA TGAATTTGATGTATATGATAGAATATAGAGACATGTCTATTTTGCTACAAATTATTGTATATTGAATATTATTACCTTTAAAGTTTAAACAGTAATTAAT GTAAATGTAAAATGATACTAGGAATTTAAACCAACAAAAAAGAATAAAGGGAACGATCCGTGTCCATAAGCTTGTAGCATGTCTTGCCTTACTTGTAGCA CCTTGCTCCTTCCTTCCCTCTCTCTCGGCCATCCTTTTGATCCTTTCCATCATTTTCATTTTCATTTTCATTTTCTATCTGCAATTCATTCATCATAATA CCAACACCAAT
• Tissue: flowers
• Gene name: LI_gene_41063;
• Additional information: details;

Expression of Ll_transcript_274545

FPKM

• FPAB: 2.3
• FPNAB: 2
• LF1: 2.8
• LF2: 1.3
• LF3: 1.4
• LF4: 2.2
• UF1: 2.3
• UF2: 0.6
• UF3: 3.3
• UF4: 2.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_274545

• Blastp: Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity
• Blastx: Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity
• Eggnog: Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ)
• Kegg: Link to kegg annotations (AT1G14410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454671.1)
• Pfam: Whirly transcription factor (PF08536.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;