| Id Trinity | FTRINITY_DN54249_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_274552 |
| Sequence | CAAATATATCAGATAGCAGATAGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGCGTGAAAATGTTGCAACCG CACTCCTGTTCTGCTACAACAAAATCTTCCATTACTATCCCAAACGACGCTTTCACTCCAAAGTTCATTCCTTTAAGGCGTTATTCTTCTTCTTCTTGTA TACCCACTTTTTCGTTTACCCTCCAACCACTCTCTATCACATGCCGCCACTCTAACCTCTATGAACCTAAATCATTTCCCTCTTCTCCACAAGCTCAACG CTATTCAGCACAACCAGCTTCAGTTGGAACTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAA TCTCCGGAATTTCAATCATTGGAATCCGGGGCATTCAAAGTATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTTGCGTCAATATG ATTGGAACAGAAAACAGGTGTTCTCGCTATCAGTGAGTGAATTGGGAACTCTAATTAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCAAA TCAGGGAAGAAGTGATGAAGGTAAAATTAGAAAAGTTTTGAAGGTGGAGCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAGAACAAG CTTGACAACATCGACGAAAATATCTTCATTCCTATTACAAAGGCAGAGTTGGCGGTTCTCAGCTCACTTTTCAATTTTATCATGCCATACCTTCTAGGTT GGCATACTTTTGGAAACTCTATAAAGCCAGATAATTCCAGCAAAGTGAATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATAGATAGA TAGATAGATAGGGATCAATCACTTTTGCTTCTAATCACTTCATGGTGTTATCAAGTGTAGAATATGTAGTGGGATCAATCACTTCAAGAGACAGTCAACA TTTAGCACATCATGTTTCTTCTAATTGTCAATGGAGATGAAGTGTTGTATTTATAGTACACAAATATAAAGTTGTGTCCATTGAACCTAGTCAGGATGTT AGTAAGGAGAGTGAAGATAGTCCCTTCTTGCATTTGCTGCTCTTAATTAATCATCAAAACTTCACACAAGTGCAGTCATTTTCATGCATATTCATATATA GTCTGCTTTGTTAATATGCATAATAGTATATTGTGTATTTAGGAGTGTTGCCGTAAATAAAAAATGTAGTAGTAACTATTTCTAAAACCAAAAACTCAAT GGTATGGATATATAAAATACACTAAATATAATCCTACACAATTTAGTAATTGTCCTTACTTTTGTTTATAGGAGTTATTTTCATCTCAAAAAAATGTCAC TAAGACTATTCATGAAATAGATGTTTTTGCAGTAATATTTTGTCCTTTAATTATACTTGCCTCCAAGTTTGTAGTATATGATAAATGTTACTGTCTTGGG TAATTTGGAAAACCATGAAGTATTCTAATGTTCTAATAAAGTAATAGTTAGAAGGTGTTATTCAATAATGTTATTAGTTCATAGTTTGGTTTGTGAATCT GATGATACTTTTTTTATTAGTCACTATTTTAAGCATGTCATTAACACTTGATCTGTACTTCTTATAAGATAAATAAATATTTGAAGAAGTAGATGAACCT GGACATAACATTGGTCCATAGTGAGAATTGAAGAATATTGTGAAGTTGCAGGACATCTGATCATATCGATTGCCCACATGCCTCTCTGCATGTTTCCCAA AGTCTTCAGTTTCAACTTTAAAGTTATTTATCCTTTTCTGCTTTTCTGATACATACTCACAACTCACAACTCACACCTCATATATATGGAATCTAGCTAG TACCTCATTCTATGTACACACAATGTTGTGTACATAGAATGCTACACTGCTTTACTTATTTTATTTTTATACTTGTTTTACCTATAATTGCTGCACATGA TTTATTAGTTTTTTGTTTTGAATTATAAAATTCATGGCTATGAAAATGACTAAAAGGGTTTGAGAAGTGATGATTTGAATCACTTTAAGAGCAAGAAATG CAATAAGGGACTTTCTTCACTCTCCTTATCAAACATCCGGACCAGGTTCAGGAGACAGAAACTAAGGTTTCTCTGACATATATGACTGTACTATATATAA ATAGAACAGTTGATGTGCATTTGTTGAGCATGACAACTCAGGAGTTAATTGTTGGCTGTCTCTTGAAGTTCCTATGAGCACTTCACACATGTGTATCACT ACTCTAATTAGAAAGAGTTAAGAGTGGTGTGAAGTGTTTGGAGGAACTTCAAGATTCATCTAACACTGATTACCAAGATTCAACTAACAAATGCAATAAG GGTTCAACTCTATGGTTCTGCATTGTCATTTTACATTTCACACTCGATTTATTACTTTTGTTCGTTACAATATAGTATAAGATTGATGTAAATAATATAT CCTTAAAATTATTAATGTATTTTGTAATTAACTAAAAATAATAAAAAAATGTTGAGTTGTATACAGAATTTGATTAGTGTTAATGTAATTTAGTGTTACT GAAATAATAATAGTATGATGAGGTATTTGATGGTAGAGGGTAAGGCCCTAAGCGAGCCCATGGGCTTAGATTAAGCAGCAAATGAGGGTGATGTGTATGT AGGTTAACATCCTTCATTCAGAGAGAGACTCAGAGAGAGAGAGACACACAGAGAGAGACACACAGAGAGAGACACAGAGAGAGACACAGACACAGAGAGA GAGAGAGAGAGAGAATGTTTGGGCGACGCAAGTTTCTTTCCTTTCCCTTAGTCATCGGGGCAGTGATGTAAGTTTCATTCTTCTCTTTCTTTCTTTCTTT CTTGCTTTCCATATTCCTTTCATCTTATCTAACTAGGGATCTTCAATTTGTATGAATAATAATAATAATAATGTATGAATAATTAATACGAAGTGGGTGA TGCTTGTAGCATTGGTGTTGTCTCTGGGAAAGCAATATTTGGAGCCCCACTTGAGGAGTATTGGAAAAAGAAGCATCAGGAAGAAGAAGCTGAAGCTGCT GCTGCAAAGGATAATCACTCATCTTCATCTTAGGACTATTTCCTTCAATTGCATTATGCTCCAACTACTGTAACCATATTACAATTATGTTTTGCTTATT ACTGTAAAATGCTCATTTTAATAATCAAATAATATTAAAACAACCTACACAATAGAGATAATCATATGTACATCAAAATTATTTCTTTTAAGATAATCAT ACGTTCAATAGAGATGGGATTGTTAACACCAAATATGTTTTATACAGCAAGTAGTTTAAAAATAGGGGTATTCACATCAAAGGTCAAACAAAAATAAATA ATTGCAAACTGCAAAAAACTATATCTGAAAACTAATCTAAAATGAATTACATTGTTATACATTATTACATTTCACCAAATGAATTATTTTTGCTGATAAA AAATAAAACAATTGAGTAGTAAATAATGTATTAGTTTTATTATGAATTTGATGTATATGATAGAATATAGAGACATGTCTATTTTGCTACAAATTATTGT ATATTGAATATTATTACCTTTAAAGTTTAAACAGTAATTAATGTAAATGTAAAATGATACTAGGAATTTAAACCAACAAAAAAGAATAAAGGGAACGATC CGTGTCCATAAGCTTGTAGCATGTCTTGCCTTACTTGTAGCACCTTGCTCCTTCCTTCCCTCTCTCTCGGCCATCCTTTTGATCCTTTCCATCATTTTCA TTTTCATTTTCATTTTCTATCTGCAATTCATTCATCATAATACCAACACCAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41063; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274552
| Blastp | Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity |
|---|---|
| Blastx | Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity |
| Eggnog | Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ) |
| Kegg | Link to kegg annotations (AT1G14410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454671.1) |
| Pfam | Whirly transcription factor (PF08536.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |