| Id Trinity | FTRINITY_DN54273_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_272689 |
| Sequence | CTTTTTAGTTAATTGTAACCAAAATCTCATTGTGCATCAGACAGCAGATCAAACAAATACTTACGCGTAAACCCATAGCAACTTTGTTTTATTAAACCAA TAATTACATTTTTCATTTTTGTAATTACAGAGCTACCCCTTTTCGTTTTTCTCCGTTCAGTTATTTCTCTTCTCCCTCTCCTAATCGCGCCCTCACAGCT GTATCATCCAAAATGTCGAAGAGAAAGGGAAATCCCCAATCTATTTGTTTTACAGGAATGGTAAGGTCATTGCTTAGTGACTAATACGTCATACGTATCC TGTAAACAACCTCCCTACTTGTCAGGTAAGACCGCAAACATATATCCTCTCAGACCTTACTGTTAGAGTCTCCTGCATTGGTCCGCCGAATGAGAAGTAA GAACTACATATTACAATGTCTTTTCTTTTATTTGAAAAGGGTTGTAATATAAGCATATAAGTGAAGTGTGGTTTAGATGTTGTGGTTGCATTACAATTAC TCTTATTGAAGAAGTAAGTGTTTTGGATCAATAATCTTTCACTATGTCCATGACCTTTTAAATCTAAAGGAAGTACTAATTTCCCCCACCCCAGAAAAAA GAGACTAAATAATTAGTTTTGCTTCTACACATGCTGTGATTATGTTATTCACTTATTGGCTACACATGGTTGGGTTTTTTCCTAGTTGAATTGATTCATT ACGGGGATGTTTTTTTTATTTTGGCTATGCCCATTAATCATTGTTAAGTCATGAAGAATGTTTTAAATTGCGGTCACGGTTGCGATTAATGTGATTGCGG TCATTGTGACAGTTGTGATGTGGATTGCGGCCATTATGGTGAAATTATTTTGTGATCAAAAAACTATTTTTGAATTCGATGCAGTCCAAATGCGGTTTGA TGCAGTTGTGTTGCTTTGTTCAGTGTCACACTACAATTGTGGTTGCAACAGTCACTAGAACTGCAGTATTGTGGCCACATCGCGTATTGTAGTCAGCAAT TTGAATCAATAGTCATGAAGTTGAATTAGTTGGATTTATGAACAAACCCTTCGCTTAATTCTTTTGAATCCCAGCCCGATTTTTCCCCACTAACCAATTA CGTTACGACCACTGTAAAAACTTGGTTGACGAACATGGTTTATGTGCCGCTAACGTAGCGGCTTGTCAAGCATTTGACAAACTGGCACCATCCATATCTC ATGCCACACTGTATCACATTGATCTTTATAACTTTTTCAGAGCAAGTGAACAAATAATCGTTATTTCTGTTTGAATAGCTGGTTGTACTTTTTATTGTTT TGCACATTTTAGTGCTTCTTATGATCCTTACTTTACAGAATATCATCCTTGAAATACAGTAATTTAACATTTTATGTTCAGGCCCCAATGGACCATCTTG ATGAAAGAGTTGAAGCTATTTCCCACTCTAAACCTACATCAAATTGGAGTATTCATATTTCATATGTGAGGAGGAAATTTTTACGTTGTAGCATTTTTTT GCATTATAATTGTAGAATACATGTTCCGGGAATCAGTATTATGTTTTTTGTGTGGATTCCTGGTCACAAATATAAATATAAAGGCCTTTTAGTAGTTAAA TCTGTGCAAGCATTTGAGTTACATACAGTTATTAGAGATTGTAAATGCTTACATATACCAGGAACTGAAAATGACATGAAGTTGAAGACTATTTTGGTTT TGTTTGTAAATAGTTTTGCTGGTAACCTGCAATCTTGGTTACTATAGCTTAATCCTTCAAAACTATTCATATCTGTGTCCTAATTTCCTTTTTGGTTGTT TCTGTTGTGCCAATTTCTTTAGTTGTAGTTTATCAGATTTCTTGTTATCACATGATGAAGGAATTTCCACATTCATTCACTTTTGACTTATTACAGATAA GAACAGTTAAGGTTAGCAACATATCACTAGTTACTCCCAAGAAGGATATTGGAGAGTTCTTTTCATTCTCAGGTGATATTCAATATATTGAAATGCACAG GGAAACTGATCGCACACAAATTGCTTATGTTACCTTCAAGGATTCACAGGGAGCGGAAACAGCAGTTCTCTTGACGGGTTCCAAGATAGGTGATCTATAT GTCACCATTGCGCTGGAGGAAAACTACCAACTGCCTCCTGAAGCTCTTCCAAGAAGTCCGGCAAACCAAACTGCTGTTGCAGTACAAAAGGCTGAAGATG TAATGAGTACCATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCAGTCAACAAGGCGAAAACCTTTGATGAACGCCATCACTTGAGCTTAAATGCTTC TTCCACAGTCGCTTCCATTGATCAAAAAATTGGTTTAAGTGATAAACTAAGCATTGGAACAGCTATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAAG TTTCAGGTTTTTGAAAGGACGAAGTCTGCTATTGCTGTTGCTGAGCAAAAGGCAAGTATTGCTGGATCTGCTATCATGAGCAACCCTTACGTATTAACCG GAGCTTCATGGATGTCAAGTGCCTTTAGTGCTATAGCAAAGGCAGCTGGAGATGTCAGCATGAAGACTAAGGAGAAGGTTGAACAAGCTGAGTTGGAAAA GAAAGAGATCATTTACAATGAAAGGAAAGAGACCATTGATGAATTTGGACGAATACACTTCGAATCTTCGGATGTTGGACCTGCAGTAGTTCCTGTCAAC TCAGGCGATGATAAGAAGCTGGAAATTATATAACATGAAGTGACTCAAAATGCTATACATCGTCATCAGCATAGTTGGATTGATTTAGTTAGCATAGTTA TTTTGGTCTTGGGTTGCTGCAGGTTTGTTGTACAACACTACAGTGACAATTCTTCTTGATTGTTATAGTGATGTTAAGATTTGTCTGACATGTGATTCTT AAATATAGCAAACATTCTTTAAAAAAAGATTGTTATTTGTATATTATCTTACTACTTTTGAGTTTTTAAATCATTCACTTGACCCTGTAGTTCCTATGTT ATTTTTAATGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41213; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_272689
| Blastp | Binding partner of ACD11 1 from Arabidopsis with 56.9% of identity |
|---|---|
| Blastx | Binding partner of ACD11 1 from Arabidopsis with 56.9% of identity |
| Eggnog | actin cytoskeleton protein(ENOG4111ICI) |
| Kegg | Link to kegg annotations (AT5G16840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420198.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |