| Id Trinity | FTRINITY_DN54280_c2_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_274184 |
| Sequence | CAAAAACACACTTACTATATTTTTATGTATCATTTCAAAACGAATTTTTTTGATAAGTAAAATTTTATTAACTAGAATGTAGCAAAGCTATCTACTAGAT TTACAAAGAAAATGTAATTGATTTTGAAACATTGATTTGAGAGCATCCACTAAGTTATTGATGGTTGGAGAGTCTATTATCTGTCCATAAATATCTGTCT GCTAGGCCATTCTCCTACTTCCATTTTTTGCATCAATTTCAGCTGAGTTGCAATATAACACCAAAGGGCTAGAAATAGTGCTCATTCAAGAGGTACAATT AAAGCTAAGATAGTGAGAGCTTTGTTTCCTTCTTTTTCTTATCTCCATATTTCATTATCATCTATATTCATGGCTAGTCCAGACTTAATAGCTTCTGTAC ATAATAATCAAGATCATCTGCTAAAACCAGCCATGGAGCTTGATCCGAGTAATATTGAAGGAGGAGGAACAGAAGGGTGTTCTTCTCATCAGAAGAAAAC AGGAAGAGGGAAAATAGAAATCAAGAGGATCGAAAACACAACAAATAGACAAGTTACTTTCTGCAAACGCAGAAATGGGTTGCTGAAGAAAGCATATGAA CTATCAGTGTTGTGTGATGCTGAAGTTGCTCTTGTTGTCTTCTCTAACCGTGGCCGCCTCTATGAATATGCAAACAACAGGTCCTTCCCTTACATTTCTT CAACAGAATATGATTATTTCCTCTGATTTTTTATGAGTTGATTGACAAGTTAACCCTTGGTGATTTGTTACTGAGTTTATTTCTGTTGGTGTGTGTGTAT GAACATATCAGAAATGTCCATTTTATGAGGCTAATAAGACTACTATCTTATGATCATATTTGGATCAATTAAATTATCTTTTACAACAAGTTTATTCAGT CACACGGTTGCATTTGAATATTTATCTTTCTTTTTACATTTGATTTTTTTTCCTCTATGAGCTTTGAAGAATATTATATTCTATAGTTATTTCACTTTTT TGTGTCTTCCAAGTGGTTTTTCTTTAAAAGGTTGCAGATCTGTGTAAGCAATAGAAATATATGTTAAGGTGCAACAATATAAAGTAATAAATATAGAAGC AGGTGAAGAAGAGTAAGAGCTTTATTCATTAGGGTTACACAGATTTGCAGGTAAGAGATCTTAGCTTCCTTTCCTTGTGTATGTGTAAATTTTCACCTTT CTCAACTCTCTCCCTCCATCTCAAATTTCTGTCTACATGTTAACAATCAAATCTTAAAAGGTCTGCACACAAAGCTGTCATGGACTCAATAAACACACTT TCTCTTCAATCTCTTGACTTTTCCTTAATATCACTTAGTACTTACTTGTCAGCTCAGCTAGCAAAACAGTGACATAACACAAGCAAGCTCATCCAATAGG AGTTAGGGTTTCAAATTTTGACTAGTCATTCTTCAATCATTTCAATTATGAGACAATAAAGCAGTGAAAGTCTGATAATCAGGGTTATTATCTACAAAAG CAATAATTGAAAAATTAGAAATAATTTTTAGGTTTTCTCCAATGGATCTGATTATGAAACAATTAGATCTAGTATTAGGGTTTTTGGACTTCAAAGGGGT CGGTTCTCTTTAAGATTGAAACGGTTTCTTAGATAATTATTTGTGTCTTTCATGAGTGTCTAAATTTCGTTCCCCACTTCCATAAATTTGTCCTTTACAC AGTGAAGGGTTAATCATGGCGCAGTTAGGGTTTCCTAGCCCATAACTCATTGTCTGCAAAAAGAAATGTCTTTGGTCGTTAGATTTTGAAATATTCTCCA ATTATTTTTCTATTTACCTCTCAATACCTTGAATTTATTACCTACAAGATAATTGTGAATTTCCTTAAAAAAAATTATAAATGAAATTTTTACTTTAACT GTTGATAAAAGTACAGTTTTCTATATTAAGTTGCAAAATACGATTTTGGGTGACTTCAGATATGGTAACTTAGTTTTTCACTAAGGACATGAGATTATTG TCTTCTTTTAGATTCATTTCCTGAAATTTGAAAGAAGTTATATATGATAATGTTTAGATATTATTCTCTCTTTTTTTCTCATTTCTGATTTCTGGTTTCT GTATACCTGGAATAGCTAAAGGTAACACCAACATGATGATGTCACTTGTATTCTAAGAATAGATAAAAGCAAATGACTTCTCTCTTTTCTTCAAATTTAA TTGCTTTCATGTTTGTGGAATAAAGCTTCTCATTCCTGACGTCAATTCCCAACCTACTCTTAATTATGTGTTTTGGACATTTCAATCAAAAGGGAAACTT GCATTTACACCTTCTCAACAATATTGTAACTGTGACATTATATTGGTATATATTATATTCCCCAGAATTCAAAGAATGAAACTTCATCCAACAATTTTCA GCTATGAATTTGTTAAATTTTTTTGGTGAGGGTATACAGAAGAGGTAACAATGAAAGGTAAAGAAAGAGATGGCATGCGCATTTCTCAGTTTCACAGATT CAGTAGCTCACTGCTCTGTTGAGTGCTGACACAAACTCTTTGATTTCTTCAACAAGAGCAGTACTACTATATTGTAAGGGTTTTGTAGTAATCGAGAAAT AAGAAAATAGGGAAAGATTATTTGCATATATATATATATATATGTATGTGTTTGTCCAATTGTCCACATAATAATTTTGACATGCAGATATCATTTTCAT TTGAAATAAGGATTGTTATGGCATGGTTATTACACCATGTGTAATGGGGTGGGAAAAAGATTTTCTGTCCCAAACGAATAGCAACAATAGCAACATGCCA CATCAGTCGAAAAAATTAAATATTCATGTTTTTACTTATTCTGATTGGCTTGGTACATAGTTGTTGAGGACATATTTGGGGACGAGAGATCTCCGTCCAA TGGCGTGATAGGTAAAAGACACACGTTGTCTGAACCTAGGAATACTTATATTTGAGCCAATCACATTGTCGGATCTTGTGCCAACTTGGCAGGGACACCC AATCAACGCTTCTACAATATTAAGGTTCAGAGAAGAACCAGTAGCAGTGCCATTTTACTACTTATTATATATCCTACTTAGTATACCATAAAATTATGGT AGCACTGTTACAAGTAAATGATAAGAGATCATTGGTTTCCGTGTAAAGATTACATATTTATAATTTCAATGTCAAAGGAGATAACATATTCTTTGTTTTT TGTTTAATCAGAAGAAAAATAATGTATTAAAGGATATTCAAATGATGTACAATACTACATACTAGTCTATTATATCCAAATCCCCTCGGTTATGGAACTT GTCCTAGTCATATAATAAGGTGGTTTGATGGTGAAGGAGGTTGGGGTGGTGTCTCACCCATAACAAAAATACTAACATACTAATAAAATTGTCGATAAAA AAAGCAGTACCCATGATAAGCCCTAGTAGAACCAGCTTAATTAATTGCAAAGAAATTTTATAACCCTCTTTTAGCTTTGCTTGTATTGTATGCAGTGTTA GAGGAACTATCGAAAGGTACAAAAAAGCATCTGCTACTTCCACAAATGCAGAATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAGGAGTCATCCAA ATTAAAGAGACAAATCCGAGACATTCAGAATCTGAACAGGCACATTCTTGGTGAATCACTTAGCTCTCTGAGTCTCAAGGAACTAAAGAACCTTGAGAGT AGATTGGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAAACTTTGTTTGCTGACGTCGAGTTCATGCAAAAGCGGGAAGTTGAGCTGCAAAACC ATAATAACTATCTGAGAGCTAAGGTATCTCTCATTACTTCCATAACTAACACACAGAGAGATAGCTGAATATGAGAGAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41278; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274184
| Blastp | Agamous-like MADS-box protein AGL5 from Arabidopsis with 82.67% of identity |
|---|---|
| Blastx | Agamous-like MADS-box protein AGL5 from Arabidopsis with 74.11% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT2G42830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461250.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |