| Id Trinity | FTRINITY_DN54293_c4_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_273600 |
| Sequence | CTTGTACGTGAGGTTAAGAAGCTTGTGCATGAAGAGTGTAATGTGGTTTCTTCTTTGGTGCAAGGGGGTGTGGGCCAAGTGGATTTTTTAAATCCATCTA GTGTTGACGGGGTGCTACCTCCACGTCAAAATCATGCAGCTACCTTGGTTGGGGATAATTCTTTTGTGCTTTGTGATACTTTGGATTCTAATTCTATTGT CCCTTTCATTGGGTCCTCGGATATTCCTAAGAAAGGAAAAGTGCCTAAGCGTTCGAAGAAGGAGAAACAGAAACAAGTTTTGATTGAGTGGAATAATTTT TGTATTGACCTTGGGGATGTTCCGGAGATTTGTAATAATGATCCAGGTGGTTGTATTCCAGGTTCTGGTTCTCTTGCTGTTTAGGTAGGCAATGATGATT CGTTCAATCCTATTAATTGTGGATCTTCCGAGAGTCTATCGGGGTCCAGTAGCAAAGGAGTGAATGTCGATGTGTTTGAGGAAGCTAAGGAAATTTGGAA TATAGGTAAGAAGATTGGCTTACGCGGGAAAGGAAATGATGAAGAAATTATCTCTCGTCTGGTTGACATGGAAAATCGTGATAAAGCTCAATTTGTTGAA CAAAGAAGGAGATCATTAACGGTTGATGATAGTACTTTCCATTAATATTCGTGGTTTGGGAGGGCGGTTGAAGAAGAAGGAGATAAGGGATCTTGTTCGT GTGAATGATCCTGATTTTGTTTGCATCCAAGAGACTAAGGTTCAAGATGTGGGTCAGGCTCTCTGTGCGAACCTGTGGGGCAGTGATGATGTTGGTTGGG CGTTTGTCCTAGTGGAGGAGTTCTCATGGGGTATTCTGAGCCTTTGGAAAAAATCTTTGTTCTTATGTGAAGATATTACATTGGGTGTTAACTTCGTGGT GGTCAAAGGGATATGGTCATTGAATAATGTCTCTTGTAACATTATGAATGTGTACAGTCCTTGTGACTTAGCTCGGAAACAGTTGTTTTGGGAGGAAGCT AAGAGGGTGTGGGCAGTTCATTGTTATGATTTATGGTGTGTAGTGGGTGACTTCAACGCTGTCTTGCATTTGAATGAGAAAAAAGATTTGGTTTCTTCTA CTTGTAGTAGAGATATAGTGGAATTTACTCGATTTGTTGAGCAGTTGAATCTAGTGGATCTTCCTCTTGTAGGATCAAAATTCAGTTGGTTTCTTTCTAA CGGTTCGGCAATGAGTAGGCTTGATAGGTTCCTTGTTAACGACAAATGGCTAGCCATTTGGGGTCGGTTGGTCCAGAAGGCTCTGAAGAGATCTTTCTCT GATCATTGTCCCATCCTCCTTAAGTCTGATGCTTCTGATTGGGGCCCTTCTCCCTTTAGAACAAATAATTTCTGGTTCTGTTGCAGGTTTCTCTAATTTT GTTGAAGAAGAGTGGAAAAAGATGGATTTTGTTGGTAGGGGTTCTTATGTGCTCAAAGAGAAACTAAAAAGTCTTAAGAGCTCTCTTAAGATTTGGAACT CTGGCCATTATGGGATTTTGGATAAGAAGATTGTAAACCAAGTGTCCATTATTAATGATATTGATGAAAAAGGTTGTGATGGTTTTCTCTCTGAAAGTGA TATCGCTGCTAGGAGTGTTGCAACATCTGATTTGTGGAGGTTTTCTTCTCATAAAGATAATATGTTGCGTAAAAAATCGAGACAAAGATGGTTGCGGGAT GGTGACTCCAACACCAAGTTCTTTCATTCTTCTATTAATAGGAGGAGGAGATATAATGAAGTTCATGGCTTGAACATTGATGATGAGTGGGTGGAAGATC CGGTCCGAGTAAAAACTCACATCAGGTCTTACTTCAAAGACAGGTTTTCTGAAGATCATTGGAATAGGCCTTCTCTCGATGGGATTGAGTTCAAACGCTT ATATTATGTTGATAACTCTTTCCTTACAGCGAGGTTTGATGAATCTGAGGTTAAGGAGGCAGTTTGGAGTTGTGATGGCGATAAGAGTCCAGGTCCTGAT GGTTTCAACTTTACCTTTATCAAGAAATTCTGGGATTGCGTTAAAGTTGATATATTGGCTATGGTGTCAGATTTCTTTTGCTATGGTAATGTTGCTAGGG GTTGCAACGCTTCTTTCATTATTCTCATTCCGAAAAATGGTAGTCCCCAAAACCTCTCAGATTATAGGCCTATTTCGTTGGTGGGATGCATTCACAAGAT TATCTCGAAGCTTCTCGCTAGTCAGCTAAAGAAGGTTATCCACTTAGTGATCTCTGATTGCCAATCGACCTTCATTAAGGTAGGTTCATTTTGGATGGAG TCCTAATTGCTAATGAGGTTATCGATCAAGCTCAGAATAGTAAGGAGGGTGATTGCTTCATCTTTAAGGTGGATTTTGAAAAAGCGTACGACTCGGTTAA TTGGTGCTTTTTGTTGTATATGATGGAAAGAATGGGATTTTGCTTCAAATGGAGAAACTAGATTAGAGTTGTCTTCAATCCAACTTGGTGTTTATTATGG TGAATGGGAATCCTACTTCGGAGTTTGCTATGACTCGTGGCTTGAGACAAGGTGACCCGATTGCCCCTTTCTTGTTTCTTATTGTTGTTGAGGGGTTGGC GGGAATGATGAGGTCTGATGTGTCTAAAGAGTTGTTTCATGGGTATTCGGTTGGTAATGATCATGTCCAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41384; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273600
| Blastp | Transposon TX1 uncharacterized 149 kDa protein from Xenopus with 26.44% of identity |
|---|---|
| Blastx | LINE-1 retrotransposable element ORF2 protein from Homo with 27.98% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429814.1) |
| Pfam | - |
| Rfam | - |
| GO | - |