Id Trinity | FTRINITY_DN54299_c0_g1_i2 |
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Name Transcript | Ll_transcript_274872 |
Sequence | TAATTTTTGGTATCTTTTTATGAAACATGAATAAAGAAAGCTTAACATAAAAAATAGTTGCTATGGTAGGAGTTTTGCACCCTCACTTCTCCAATGCAGG AGTTTCTTCATTTATCTGTAAGCTATGTTATTTTCTTTACCCTTTTAAGCTTTGTTCACAATCTCACAACATACTAAGTACTTATTTTTGGATGCTCTAA GTATACGTGATTCATCTGTATGAATAGTCTAGTAGTAGCGACTCAATCAAATCAATGATTATAAGTCTCTGAGGTCATGCGTTTAAATCGCATGTTTCGG AGGAATAAAATAATGCAGGGGTATTCAACCTTAATAGTTGATACATTCAGTAGATTCATAGTGGATAACATGTCAAGGCTAAGGTGTTACAAATACTTTA TTTATAGTTATATGGTTTCGTCATTTAGCTTATGTAACATGAAATTCTGCTTACCAGATTCGTTATAAAAGAAGTCTTGTAATAATAATAATGAAAAACT GACGAAATGTCTAAAACCGGTATTGGGTATCATGTAAGTTGTAACTATGAGTTAATGACACTGATAAGCCTTCTGATTATTTGCAGCAACAGAAAGTTAC CATATTCAGAATCCATGTATCCATATAACATCACCAGGAGTAATTAAATGTCTTAGTTCTTCAATTCATCACAGAATGTCTAAGGTGACAAGTGATAGCA GAAGTGACACAAAGGTTATGGCAAATAGGAGAAGAAGAGCAAATGAAAGAACTGAAACTTATGTACTATTAGAGCCAGGAAAGGATGAGAAGTTTGTTAG TGAGGAAGAGTTGAAGGCCACATTGAAAGTGTGGCTTGAAAATTGGCCTGGAAAGTCTCTTCCTCCTGATCTTGCAAGATATGAGAGCATTGATGATGCT GTTTCATTCCTAGTCAGATCTGTTTGTGAACTTGAAATTGATGGTAATGTTGGTTCAGTACAATGGTATGAAGTTCGTTTGGAGTGAATAGTGTTAATCA TACATCAGTTAAATATGTGATTGACATGAGACAGGGTATGGGACACCATTCGGGACGGGTGATATCCGTTCCACTTTGTGATCATAACTTTTGGTTCTCT TGTTATGGATACAAACATGTTAACCTTGTTGTATTGGAATTTGGAAAGTGTAGTGTTGTACCTGTTTTACTAGTTAGCTAAATCTTATTGCCACCAAAAG TTTTAATGAGGGTCAATAATTTTTCTAGGAAAGTTATTTTGATCTCCTAAATATTGAAAAGTTTTGCATATAAAACATTTTCCTTACTTTCGCACGGTAT TTTAAATTATAGTTGTGATTACGGTAACGGTTGTAGTTACTGCGATTGTGGTCATTGCG BLAST |
Tissue | flowers |
Gene name | LI_gene_41445; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274872
Blastp | Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic from Arabidopsis with 66.67% of identity |
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Blastx | Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic from Arabidopsis with 51.06% of identity |
Eggnog | Protein of unknown function (DUF3571)(ENOG41100U8) |
Kegg | Link to kegg annotations (AT5G39210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426889.1) |
Pfam | Protein CHLORORESPIRATORY REDUCTION 7 (PF12095.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |