Ll_transcript_196358

Id TrinityFTRINITY_DN54305_c0_g2_i20
Name TranscriptLl_transcript_196358
SequenceCAAGTTCTGAGCTCGAAGGGGCAACAAAACCATCCACCATGACCTAGCATAGATTTTGTTTAAATAATTCTTCAGTATTGCATTCTAATTAGATTTTTCA ATCGACTAATTTCAAAATAGCTTATATCTTAAAAACAGCTTTTATGTATCAGATTAATAATTAATTCACATGAAACACCAGTAAATAAAGTGGTGACGTA GTTGTGTAAAAGTTGCATGATCCATTCGGAAAGAAATCCACCAAGTCAGCGTTGGCGGTGAGTAATATCACATCACAAAATAAAAAGAAACAGACTCAGA AAACCGTCTCAGGCACCGAAACGACGTGAAGTGATTATGACGAAGACGACGTCGTATTTGACATCGACGCAGAGGTATGCTGGCGGAGCCTTGTTCGGGT TGGCTCTTCACCAGACCCAGGTTCACCAGACCCACCCGGTTGGATTAATCTTCGAAGAACAAGAACCATCGAGTAGCAGTAGCTTCACCGCAGATGCAGT TTCCGATGATCCCCACCTTTGGGTCCATCCCCACTCCTCTTTGCTCCGTCCCGTTCTCAAGTATCTAGATATTGATTCTGCAGCATGGTCTGGACTTGAG GAAACTGCTGGCTCTTCTTCAGCTACACGTCATGTGGGACCTTTGTTGAGATTACTCTCAGAAGAATTTGATGATGATTATTCTCAAAGATCAGATCAAG AACTTGCTTTGTCAGAAGCTGTTGATGCTATGGTAATTAGCTTAGAAAAAAATTCAAAGTCTTCTAAGTCTAAAAGAGAGCAGTTTCGTGACTACGAGCA ACAATGTCGTGAAAAGTTTTCGACTTCTGATGTTCAACCAATTTCTGAGAAGGAAGATATGCATTTGGAAACTCAGCAGGAGACAGAGACTCCCCCTTTC TTTGACTGTGAAGGCCTAAGTCAGGGATCTATTAATAGTAAACTCGACGAAAGCCCAGTTGAAGAGGTAATGATGCTCACCTATCAGAGGAAAGTGACAG TTCTCTTTGAACTTCTTTCTGCCTGTCTGTCAGATTTAGGTGAAAGCAACAAGAAATCTACTCGGAAGAGAAGGGGTTATGATGCTCGACATCGTGTGGC TCTACGATTGCTGGCAACTTGGCTTGATATCAATTGGACAAAAATGGAGGCCATTGAGACAATACTTGCTAGTTCTGCAATGGCTTTCGTTAAGGAGCAA GAATCGAATAAAGAAGAAACTCAGTCAAAAGAAAGCAGTTGGGATAAATGGAAGCGAGGTGGTATTATTGGTGCTGCTGCGTTAACAGGGGGAGCCTTGA TGGCCATTACCGGTGGGTTAGCTGCCCCAGCAATTGCTGCTGGACTTGGTGCTTTGGCTCCAACTTTGGGTACTCTGATTCCTGTAATTGGAGCAGGTGG ATTTGCTGCAGCTGCTAGTGCTGCAGGAACAGTTGCTGGTTCTGTTGCCGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGACTTACTGGAAGCAAAATG GCTAGGAGAGTTGGGGGTGTTGATGAGTTTGAATTCAAGCCTATTGGAGAAAATCATAACCAAGGTAGGTTAGCGGTTGAGATCTTAATCTCTGGATTTG TCTTTGAGAAGGAAGACTTCGTAAGACCATGGGAGGGGGAAAATGACAATTTGGAGAGGTATGCGTTGCAGTGGGAGTCCAAGAATCTTATCGCCGTGAG CACTGCAATTCAAGATTGGCTTACTTCAAGACTTGCAATGGAGCTGATGAAGCGAGGGGCAATGATGACCGTTTTGAGCACACTTTTAACTGCATTGGCT TGGCCTGCTGTATTACTTGCAGCAACTGATTTCATAGACAGTAAATGGACAATTGCTATCAAAAGATCAGACAAAGCAGGAAGATTGCTTGCTGATGTAT TGTTAAGAGGATTGCAAGGAAACAGGCCTGTGACACTTGTAGGATTCTCACTTGGGGCTAGAGTTATTTTTAAGTGTTTGAAGTGTTTGGCTGAAACAGA AAACAGTGCTGAACTAGTAGAAAGAGTTGTTCTTCTTGGAGCCCCCATCCCAATCAAGGACGAGAACTGGGAAGCTGCCAGAAAGATGGTAGCAGGAAGA TTTGTAAATGCATATTCAAGGAACGATTGGATGCTTGGAGTTGCCTTCCGTGCCAGTCTACTTACAAAAGGATTGGCTGGAATCCAACCAATCGATATTC CTGGGATCCAAAATATTGACGTGACAGATCATATAGAAGGCCATTCTTCTTATCTGTGGGCTACACAGCAGATCTTAGACCAACTGCAATTGGATGAATA TTATCCTGTTTATAACAACATTCTTTGCATACAGTGAACTTCGAATGGCTCATGGCGGTGTTGTTTCTCTGTTTACTATTATTCTGTCAGCTGTCGAATT TGCCGCTTTTGCTGTGTTCTGCACTTCCCTCTGCCATCTCTTTTCTTCATATTTTTCTCCAACTTAACTTCATTTTAATTTACATTGATTGGGGTAATGG ATTGATTGGAAAGATAAAAGATTGAATCTTTGATCTTCAAATCTGGTTTTCCCGAACTTGGTTCAGTCAGCATATGCTACAACCATTTTTGGTTTTATTG TTTGAGTTCAGGAGAATTTGTTTTTGAGTTGGTGTTTTGGTTAAAGAGCACCACTCCTCTGAGTATGGAGAAACTATTAGGTATGATGTTATATATGATA TTACTGTAACTGGCAATTGTATAGTTGAGTTTGCTTTCATATGTATTTGAAATTTAAATCATTATAGAGTGATTAGTTAGTTTGTCTTTCTGATTTGTAT AGTAGAGAATGTTCTCATCATAGGACTGTGAACAATATGGATCCAAATGAACAACTTATTATTTTCAGGATACTTACTTTTGTTTGAATTGGTTGCTTCA TATATTGCAGTGTCTTTTTGATGCATTTTGATTGAT BLAST
Tissueflowers
Gene nameLI_gene_41495; 
Additional informationdetails; 

Expression of Ll_transcript_196358

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_196358
BlastpTransmembrane and coiled-coil domain-containing protein 4 from Mus with 40.82% of identity
BlastxTransmembrane and coiled-coil domain-containing protein 4 from Homo with 39.46% of identity
Eggnogtransmembrane and coiled-coil(ENOG410YB1Z)
KeggLink to kegg annotations (77056)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444801.1)
PfamProtein of unknown function (DUF726) (PF05277.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;