Ll_transcript_196362

• Id Trinity: FTRINITY_DN54305_c0_g2_i24
• Name Transcript: Ll_transcript_196362
• Sequence: CTTATATTAGATTATGAAAATATATAAAAAAATAAAAAACTCTATATATAAAGTAAACCATAAATAGTTGGATATCTATACCAGAAATACAGGTTCAATG AAATATATTTTTACAAAGATATCTTCAAAATAATTACTCAGGTTTTATAATAAGTAAAAAGATATAAGGAAATCATTCTAACCCAATACAATATAAAAAT TCAAATGTTATTAAAAAATCATAATATTAAAAGAACTAAACCAAAATAATTATTAACCATGACAAAGATTATGAGACTATCTAAATAATAAAGTATAAAG ACAAATAAAATATAAAAAAAACTATTGTACAGAAATAACATTCTTTCACAAAGTGACATTGAACCGTCCTTCAGCCTTTCCTTTTGCAATCACCGAAACG TGACCTCTCTGTACCTGTGACACTCAATAACCGCACAGAAGAATTCCAACAGATCCATCTCTGCATTAATTGCAAAAATCTATGGCGTCGCCGTCGATGA CGACGTCGTTTCTGTCCCCGACGCAGAGGTACGCTGCCGCGGCCTTGTTCAGCCTCGCCGTTCACGAGGCTCAGTTTCACCAGACCCAATCGTTAGCCTT ACCCGCTTCGGATGCTATCCTCAACGAGGAACGAACCAGCACCAGTAGCTCAAGCAGTGACTCAGTTTCCGAGGACCCGGACCTTTGGGTTCACCACAAC TCAGGCTTGCTTCGTCCCGTTTTCAAGTTTCTAGATATTGATTCTTCAGCATGGCCTGGACTTGAAGAAACTGCCGGGGCTATTTCCGGTACACACCATG TTGGACCCTTTTTGAGATTACTCTCAGAAGAATATGACGAAGGTTCTTCTCAAAGGTTAGATCAAGAACTTGCTTTGTTAAAAGCTGTTAATGGTATACT ACAAGGAATGGAGGAAGATTCCGAGTCTTCCAAATCTAAAAGAGAGAAGTTTCATGAATTCAAGGATCAATATCGTGAAAAATTTGCGGCTCCTGATGTG AAGCCTATGGCAGGAACTCAGCCAGAGGGACAGACAGATAACCCTTTTCTTGATTGCGAAGACTTGCACCAGGGATCTATTAATAGTAAAATAGATGAGG GACCAATTGAAGAGGTAATGATGCTCAGCGATCAGAGGAAGGTGACAGTTCTCTATGAGCTTCTCTCTGCTTGTTTGTCAGATATAGGAGAAGATAACAA GAAATATACCAGGAGAAGAAAGGGATATGATGCTCGAATTCGTGTGGCTCTGAGGTTGCTGGCAACTTGGCTTGATATCAAGTGGATGAAAATGGAAGCC ATTGAGACCATGGTGGCTTGCTCTGCTATGGCTTTCATTAAAGAGCAAGAATCAAACAAAGAAGAAATTCGACCAAAGGAAAGCAAGTGGGCTAAATGGA AGCGTGGTGGTATTATTGGTGCTGCTGCAATAACTGGGGGGACCTTGTTGGCTGTTACTGGTGGGTTAGCTGCACCAGCAATTGCTGCAGGACTTGGTGC TTTGGCTCCAACTTTGGGTACTCTTATCCCTGTAATTGGAGCAAGCGGTTTTGCTGCAGCTGCTGGTGCTGCAGGAACTATTGCTGGTTCTGTTGCTGTT GCTGCATCATTTGGAGCTGCTGGAGCTGGACTTACTGGAAGCAAAATGGCTAGGAGAGTTGGGGGTGTTGATGAGTTTGAATTCAAGCCTATTGGAGAAA ATCATAACCAAGGTAGGTTAGCGGTTGAGATCTTAATCTCTGGATTTGTCTTTGAGAAGGAAGACTTCGTAAGACCATGGGAGGGGGAAAATGACAATTT GGAGAGGTATGCGTTGCAGTGGGAGTCCAAGAATCTTATCGCCGTGAGCACTGCAATTCAAGATTGGCTTACTTCAAGACTTGCAATGGAGCTGATGAAG CGAGGGGCAATGATGACCGTTTTGAGCACACTTTTAACTGCATTGGCTTGGCCTGCTGTATTACTTGCAGCAACTGATTTCATAGACAGTAAATGGACAA TTGCTATCAAAAGATCAGACAAAGCAGGAAGATTGCTTGCTGATGTATTGTTAAGAGGATTGCAAGGAAACAGGCCTGTGACACTTGTAGGATTCTCACT TGGGGCTAGAGTTATTTTTAAGTGTTTGAAGTGTTTGGCTGAAACAGAAAACAGTGCTGAACTAGTAGAAAGAGTTGTTCTTCTTGGAGCCCCCATCCCA ATCAAGGACGAGAACTGGGAAGCTGCCAGAAAGATGGTAGCAGGAAGATTTGTAAATGCATATTCAAGGAACGATTGGATGCTTGGAGTTGCCTTCCGTG CCAGTCTACTTACAAAAGGATTGGCTGGAATCCAACCAATCGATATTCCTGGGATCCAAAATATTGACGTGACAGATCATATAGAAGGCCATTCTTCTTA TCTGTGGGCTACACAGCAGATCTTAGACCAACTGCAATTGGATGAATATTATCCTGTTTATAACAACATTCTTTGCATACAGTGAACTTCGAATGGCTCA TGGCGGTGTTGTTTCTCTGTTTACTATTATTCTGTCAGCTGTCGAATTTGCCGCTTTTGCTGTGTTCTGCACTTCCCTCTGCCATCTCTTTTCTTCATAT TTTTCTCCAACTTAACTTCATTTTAATTTACATTGATTGGGGTAATGGATTGATTGGAAAGATAAAAGATTGAATCTTTGATCTTCAAATCTGGTTTTCC CGAACTTGGTTCAGTCAGCATATGCTACAACCATTTTTGGTTTTATTGTTTGAGTTCAGGAGAATTTGTTTTTGAGTTGGTGTTTTGGTTAAAGAGCACC ACTCCTCTGAGTATGGAGAAACTATTAGGTATGATGTTATATATGATATTACTGTAACTGGCAATTGTATAGTTGAGTTTGCTTTCATATGTATTTGAAA TTTAAATCATTATAGAGTGATTAGTTAGTTTGTCTTTCTGATTTGTATAGTAGAGAATGTTCTCATCATAGGACTGTGAACAATATGGATCCAAATGAAC AACTTATTATTTTCAGGATACTTACTTTTGTTTGAATTGGTTGCTTCATATATTGCAGTGTCTTTTTGATGCATTTTGATTGAT
• Tissue: flowers
• Gene name: LI_gene_41495;
• Additional information: details;

Expression of Ll_transcript_196362

FPKM

• FPAB: 6.3
• FPNAB: 9.7
• LF1: 5.7
• LF2: 5
• LF3: 5.1
• LF4: 4.8
• UF1: 4.2
• UF2: 4.6
• UF3: 3.5
• UF4: 4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_196362

• Blastp: Transmembrane and coiled-coil domain-containing protein 4 from Mus with 40.48% of identity
• Blastx: Transmembrane and coiled-coil domain-containing protein 4 from Homo with 39.46% of identity
• Eggnog: transmembrane and coiled-coil(ENOG410YB1Z)
• Kegg: Link to kegg annotations (77056)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421555.1)
• Pfam: Protein of unknown function (DUF726) (PF05277.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;