| Id Trinity | FTRINITY_DN54305_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_196340 |
| Sequence | GTAAATAAGTGTATGAACATTTCAAAACAACATTAAGTAGTAGCGGAAATTAGGCTATAATAATGGCGCGCTCAAGTCACAGGGAGAAACATGCGTTTCG CGGTAGAAATAGCCGTTTCTTTTCATTCATCAATTAATAACGCGAATTTGAAGTTTGAACAAGTACACAAGCCATGCTCACTTTTTCATTTTGATCTCTC TCTCACTCACACGAAAAGGAAGGGGAAATTTCGATCGCGTTCAAATTTCATATTCTATTTCTGTTTTGAATCGTGTTTTGTAATGGAAGAAACATCATCG ATCTTGTTGCCTACTCAAAGATACGCAGCGGCTGGTGTGTTTGCTCTCGCACTTCACCACTCTCAAATCCACTATCATCAACCTCTCACTCACGATAATC ACGACCTCTGGATTCACGATGAGTCTGGTTTGCTTTGCCCGGTTTTTAGGTTTCTAGGATTGGATGACCAAGCCTGGCATGGCCTAAGGGAAATTGCAGC TTCTTCTTCCCAATTCAAGCATAGCCTAGAATCTTTTTTAAAAGTACTGGCTGAGGAAGATGCAAATTGTTCAGAAAGATTGGATAAAGAGGCTGCATTG ACTAAAGCTGTTGGTGCCACATCTGTGAGCATGAATACTGCTGCTGATTCTTCAGATGCAGAAAGTGGGGAGCACCACCAGACAACTCGAAGCCGAGAAG ATTCATGTGATGTTGGGATAAAATCCTCTTCTGTAGCTGCTGATGAAACTACGGAGAGCTCAGCTCTTCTGACCCCACAGCTAGAGAAACAAGCATCTAC TGCAATTGGAAATGCAAGTTTTGAACAACCTTTGGAGGAGGCATCTCTTATCAGATACCCAAGGAAAGTGACAGTTCTTTACACACTTCTTTCGGCTTGT GTAGCAGATACTACTGAGGTCGTTGACAAGAAATGCTGTCAGTCAAGGCAAGGCTATGATGCTCGTTACCGTGTGGCTCTGAGGTTGCTTGCTTTGTGGC TTGGTGTCAAATGGAATGAAATGGAAGCAATGGAGGCTATGGTTGCTTTTTCTTTAATGGATTCAGTGAGTAAAGAAGTTCCCAAGGAAAATGACTCTGT AGGTTCAGAAACCGATTGGGATAAATGGAAGCGTGGAGGTATCATAGGAGCAGCTGCTGTAACTGGAGGAACCTTAATGGCTGTAACTGGTGGCCTGGCA GCCCCTGCAATTGCTCATGGATTGGGTGCTTTGGCTCCTGTATTGGGTGGTATTGTTCCTGCCATTGGTGGTGGAGTTGCTGCTGCAGCAACTGCTACAG GATCTGCTGTTGGATCTGTAGCTGTTGCTGCATCATTTGGAGCTGCTGGAGCTGGCCTTACTGGGAGTAAGATGGCTACAAGAATTGGAAGCCTTGAGGA ATTTGAGTTGAAAGAAGTTGGAGGAGTTCATCAAGGCCACCTAGCAGTTGGAATCTCCATTTCTGGGCTTGCATTTGAGGAGAAAGATTTTATAGAACCT TGGGAAGGTCACAATGATAACATGGAGAGGTATGTGCTCCAATACGAGTCCAAAAATTTGATTGCACTGAGCACCGCCATCCAGGACTGGCTTACTTCAA GAATTGCGATTGAATTGATGAAAGAAGGTGCCATGCTTACAGTATTAAGCTCACTTGTGGCGGCACTAGCATGGCCAGCAACTTTAATTACTACATTTGA TATCATAGACAGCAAATGGGCAGTTGCAGTGGACAGGCTAGTGCTTATAGTCTTTGGTTGTAATACCCATGTAAAATGGATGTGATATGCTAATGGCTAT TTAAACCAGTAAAGTTTATTCACCATTATATTAATAATTCTGTCTTACTTGTGGAAAGTTCAAAAAATTATAAAATGTGGCCTATGTTGAATATTTTTTC TTTAGGGAACATAAAGATGGTCCTTGGTGTATTCTTGCGGTTTGTTAGTGATCTATCTTGACCTTTTTGAATTTTCGTACATGATATATAGCCTGGCTCT CCTCTTTGTTGGAGCAGATCAGACAAGGCTGGTAAGGTGCTTGCTGAAGTGTTGCTGAAAGGCTTGCAAGGAAACAGGTGACACCATCTAATGTGAATGC AACAGGTTAATGTTAATATTACTTCATTATATGATCCAATATATTTGGTAGCTTTCAATTTATGGTCCAGGCCTGTGACACTAGTAGGTTTTTCATTGGG AGCCCGTGTTATTTTCAAGTGTCTCCAATGTTTGGCTGACTCCAAAGGAGACAATGCTGGACTGGTGGAAAGGGTTGTTATCCTTGGAGCACCTATTCCA ATTAAAGATGAAAATTGGGAGGCAGCTAGGAAGGTGGTGGCTGGAAGGTTTGTGAACGCTTACTCTACAGATGACTGGACACTCGGTATAACTTACCGTG CTAGGTATGGGTTATATATATGATTTATGGAAAAGCTCCTCTAAATTGATCTTGTCTATGAAGTGAAAAAGTAAAAGTCTTTCACCTTTGATTTAACAAT GTTCGTAGACATCTCAACCTGCTAGGTGATCCAAAGGTGGATATACTCTTACTTTCTCACTTTAGTGAGTCCTTATCCTTGATTTATGTCAAGTCATGCT AACAATGTGTTGAATATTTGACTACTTTTGAATAAAAAGTACCCAAAACTTATTATATCTGAAACTAGATCAAGGACAATAATGTACTTGCCACTGTAAG GTAGTAATAGTTTTTATAATTTGAAAGTTATTGGTTATTAAGATCCTCGGTGGGAACTTATCCCCCAAAGTGCTACTCCATGGCTCTTATTCTAATTTCT CCATTGAATCTGTTGGTTCTGAGGATTTTCTGTCATTGTTAAAAGTGATACAGGAACTTCAAAATGAGGTTTACATCAAAACTCTTGAAACTATTTAAAG TGGATTATAATTTATTTTCATGACATCCCGTTGTCCTACAGCATGAAACTGAACCAGTCAGTTTTCACTCTGCCAAGTTCTATGTAAAAGATTTTTCATC CCAATCTGTTTTATCTCTTCTTATTTCTACATTCCCTATAAACATGGCATAAACATAAGCTCACATATTTTTTGAAATATTATGCACGAGTTAAGATCCT CTCCATTAATGGAGAGGCGAGTACCACTAAAACACACTAAAAAGTAGCATTGTAAAGACTTTTTTATTCTTTTTTATATAATGAAATAACACATTTGTCA TTGGAAATATATAGAAAAACAAGTAATTGTCTCTCCATTAATGGAGAGGATCCTTCTTCATTATGCACGCAGTTTGCTTTCACAAGGATTAGCTGGAATC CAACCTGTTGATCTTCCTGGGATTCAGAATATTGATTTGACACATGTTATAGAAGGCCACTCTTCCTACCTGTGGATGACACGGAAAATACTGGAGCAGC TTGAATTGGACAATTATTATGCCGCTTTCCGAAGCGAACATGAAAACCCTCAGCATGAGAAGAGTACATCAAACTAGCTTCATTTTCTCTTGATTCTTCT ACTCTTCTCTCCACCATTTTTTCTTTTCTGAGGGATCAATATCAAATATGTTTTTCTTTAGTCTGCTGCCTGTTGATTTGTTGTAGATAGGTAAAATTAG AAAGTGGACATTTTAAAAGAACTGGTGGAGAGGCGGTTTATGTACCTACAAAGAGAAGGAAGAAATGAATATGAAATAAGCTTGTTTCTGCATGTAAATG ACCATGGATAATTGGATATGGAGCGCACTGAGGTAATCGTCTACTAGCTTTTCAATTGAATTCATGATGCCCAAGGAAATTCTAATTCCCCTCGGATATT AGGACTGTCATATGATACCTGAACTAGCAAGTTACTCGCGGTTATTACTATGGAGATACAAAGATGGTTATTAGATATAGATTTTTTAAGTTAAATTTAT TCATTATGGTTTGTTATGCTAGTATGGTCCAACTGCCCAAGGCATGTATTTTTTAGTGTAGTAGAGTATTATTTTACAAATTTTTATATTCCAAGTATTC ATCATATTTGATCATGATTTTAGAAAAGTAATATATTCATCATCCATCATATAGGTCTGTAAAATATAGTATAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41495; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196340
| Blastp | Uncharacterized membrane protein F35D11.3 from Caenorhabditis with 34.33% of identity |
|---|---|
| Blastx | Transmembrane and coiled-coil domain-containing protein 4 from Homo with 40.15% of identity |
| Eggnog | transmembrane and coiled-coil(ENOG410YB1Z) |
| Kegg | Link to kegg annotations (CELE_F35D11.3) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416053.1) |
| Pfam | Protein of unknown function (DUF726) (PF05277.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |