Ll_transcript_196638

• Id Trinity: FTRINITY_DN54308_c1_g2_i5
• Name Transcript: Ll_transcript_196638
• Sequence: TACTATATATAGGTTATTCTTGTTAGAATATATATATATATATATGTATTTCTTATCTTTAAAGAAAACTCATAAATATTAGGAGTTAGATAGATAGAAT AGAAAAATAAAAACCTAATTATCAATTATATAAATGATCTAATATATGAATTAAATTGAAGTTTGTTAACATATTATTAGTCTTCCACAACTGTCGTTGG CTCAAGTGTACATGATCCCCTTAAGTAAGGACTCGGGTTCTATCGCCCCACATACTTGTGAATATTTTCGGCTCGAAAAGGATTGCCTCCAGTGCGGCGA TAACACACGCGAAAAACCAAAAAAAAAATTTATTAGTCTCCACATAAATATTTCCTTATTATAAGGTGGTAACTAGTTTTACCAAGTGTTTTGCGACATC TGGGTGACATAGCACGTGGGAAACGTAGCCCTTAAATTAAGGGAATGATTTGACCTTTAACCAATACAATAAAAGTGAAAGTTGATTTTTTCCCTTAACA AGTAACAACCCAAGTGGCAAATATGAAAAAGGTAAGGATGAAATTGCAAAAAAGGAATAAGTGACCTAGCATATATATACATATATGTATGTTTTGTATG AATGAAACATAGAAAGGAAGATGAGTTATGAAAAGGTTTATAGATCCGCTTACAGAGGCGTGAGGTCTCTTCTCTCTGCTTCTAAATGCTCTAATTCTCG TTTTTACTCTGGTACACTTTTCCCAATCTCACTACACTTATTTTCCTTTTTCTTTCTTTCTTTTTATGTACAAAAAATATAATTGATCGATAATGATGTT TTGGCTGTTTCTTCAATCTTGATTAATGATTATCCATTGCTCCATTATTGTCATGTGTTATCACAATTCTTCCTTGCGGCGATTTTAATTCGTTTGTCTT GTTCCTCTCTTTCCACTTTTTTATACTTTCTTTATTTATTTTATTGCTATTTAATGTTTCCACAACACTTAGTTGTTATCCTCTTACTAATCCTCCAACC CACACAAAAACAAACATGTGTCACTTAGGTGAGTAAAAGGATTAATAAGAGGATTTAGTAGGAGAATATATCATTTTCCTTTTTATAATATCACTCTTTA CCACTGTGACTGACTTCTTGGATTGGTTTAAAAAATTAATTTATTACCTAATTTAAATATTATTAGAATCAGACAAAAAATTGTTACGTGGAGTTGGCAC ACATGTTGTGATACAGGTGATCAAATAGACCATCCCGCGGGATCACCCATCCCGGATTCTCTATATCGGGTGAATCAGATATTGCCACATGAATAAAATA GAATTTTTAAAAACAAAAAAATAATATTTTGATTAATTAGGTAGGATGAAATGAAAAGCTAATGGAATTGAAAGTATAAGCAATTTCAATTCCATTAGCT AGCCTTAAGAATATAACACCATGCTTTTAATTGAAAAGTATGAGTTTTGCTGTTAATGTTATTATGTGTCTGCTGTTTGCAAATTAGAGCTTGAGTTTCT CAGGGACTGACTCAACCGGGTTCATTATCTTTGTAGAAGGGCTTGCAGTAGGTGCTGCAGCTGCAGTTTCATTCACTACTAAAGTTCCTGTTCTAGCTTC AGCTTATAGGAAGTCTCGTTCTGGAAGTGGTTCCGGAGCATGGATTTCAGGAGCTCTCGCTCTTCCTGCTGCAGCTTACATGCTCCAAGATCAGGAGGTG CATGCTGCAGAGCTGGAGCGTACCTTCATTGCTATTAAGCCTGATGGAGTGCAGAGAGGACTGATTTCAGAGATTATTTCACGTTTCGAGAGAAAAGGGT ACAAGCTCGTAGGAATTAAAGTACTGACTCCTTCGAAGGAATTTGCCCAGAAGCATTATCATGACCTAAAGGAAAGACCCTTCTTTGGTGAGCTATGTGG ATTCCTAAGCTCTGGTCCTGTTATTGCAATGGTTTGGGAAGGACAGGGAGTTATAGTGTATGGCCGGAAACTAATCGGAGCCACGGATCCACAGAAATCA GAGCCCGGAACTATCAGAGGTGATCTTGCTGTTAATGTTGGAAGAAATATCATCCATGGGAGTGATGGTCCAGAAACTGCTAAGGATGAGATTAAGTTGT GGTTTAAGCCAGAGGAGTTAGTTAATTACACCAGCAATGCCGAGAAGTGGATTTATGGTGCCAATTGATTATTTTCCTCACCCATTTTGACTTTCCATCT TGCTAGCATAAGGAATGAGAAGGGAAGCATGATTTTTGTAATAAATTATTTGTCTCTCGTGAGAACCAAAATGTGAACAATGACCCTATAAGCCATGAAT AAGTGGAAATGAGAACAATTCGTTAGCCCTAGTATATTTATTTCACTATATTGGGAATTAGGAATTACATTATTTCATCTCTCACATGAAGACTATCTAC TTCAATTTCTGCGCTAGTTACTTCAATGCCAACAAGGATCTGTTGTCCCAAAGCCTATTCTAAACGAAAGTAACATGCCACATCAGTAAAAAAAAAATTA AACATTCATGTTT
• Tissue: flowers
• Gene name: LI_gene_41518;
• Additional information: details;

Expression of Ll_transcript_196638

FPKM

• FPAB: 9.8
• FPNAB: 5.9
• LF1: 1.2
• LF2: 0.8
• LF3: 0.5
• LF4: 0.8
• UF1: 0.8
• UF2: 0.8
• UF3: 0.9
• UF4: 0.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_196638

• Blastp: Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial from Arabidopsis with 89.51% of identity
• Blastx: Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial from Arabidopsis with 84.26% of identity
• Eggnog: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity)(COG0105)
• Kegg: Link to kegg annotations (AT4G23900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444631.1)
• Pfam: Nucleoside diphosphate kinase (PF00334.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;