| Id Trinity | FTRINITY_DN54308_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_196642 |
| Sequence | TACTATATATAGGTTATTCTTGTTAGAATATATATATATATATATGTATTTCTTATCTTTAAAGAAAACTCATAAATATTAGGAGTTAGATAGATAGAAT AGAAAAATAAAAACCTAATTATCAATTATATAAATGATCTAATATATGAATTAAATTGAAGTTTGTTAACATATTATTAGTCTTCCACAACTGTCGTTGG CTCAAGTGTACATGATCCCCTTAAGTAAGGACTCGGGTTCTATCGCCCCACATACTTGTGAATATTTTCGGCTCGAAAAGGATTGCCTCCAGTGCGGCGA TAACACACGCGAAAAACCAAAAAAAAAATTTATTAGTCTCCACATAAATATTTCCTTATTATAAGGTGGTAACTAGTTTTACCAAGTGTTTTGCGACATC TGGGTGACATAGCACGTGGGAAACGTAGCCCTTAAATTAAGGGAATGATTTGACCTTTAACCAATACAATAAAAGTGAAAGTTGATTTTTTCCCTTAACA AGTAACAACCCAAGTGGCAAATATGAAAAAGGTAAGGATGAAATTGCAAAAAAGGAATAAGTGACCTAGCATATATATACATATATGTATGTTTTGTATG AATGAAACATAGAAAGGAAGATGAGTTATGAAAAGGTTTATAGATCCGCTTACAGAGGCGTGAGGTCTCTTCTCTCTGCTTCTAAATGCTCTAATTCTCG TTTTTACTCTGGTACACTTTTCCCAATCTCACTACACTTATTTTCCTTTTTCTTTCTTTCTTTTTATGTACAAAAAATATAATTGATCGATAATGATGTT TTGGCTGTTTCTTCAATCTTGATTAATGATTATCCATTGCTCCATTATTGTCATGTGTTATCACAATTCTTCCTTGCGGCGATTTTAATTCGTTTGTCTT GTTCCTCTCTTTCCACTTTTTTATACTTTCTTTATTTATTTTATTGCTATTTAATGTTTCCACAACACTTAGTTGTTATCCTCTTACTAATCCTCCAACC CACACAAAAACAAACATGTGTCACTTAGGTGAGTAAAAGGATTAATAAGAGGATTTAGTAGGAGAATATATCATTTTCCTTTTTATAATATCACTCTTTA CCACTGTGACTGACTTCTTGGATTGGTTTAAAAAATTAATTTATTACCTAATTTAAATATTATTAGAATCAGACAAAAAATTGTTACGTGGAGTTGGCAC ACATGTTGTGATACAGGTGATCAAATAGACCATCCCGCGGGATCACCCATCCCGGATTCTCTATATCGGGTGAATCAGATATTGCCACATGAATAAAATA GAATTTTTAAAAACAAAAAAATAATATTTTGATTAATTAGGTAGGATGAAATGAAAAGCTAATGGAATTGAAAGTATAAGCAATTTCAATTCCATTAGCT AGCCTTAAGAATATAACACCATGCTTTTAATTGAAAAGTATGAGTTTTGCTGTTAATGTTATTATGTGTCTGCTGTTTGCAAATTAGAGCTTGAGTTTCT CAGGGACTGACTCAACCGGGTTCATTATCTTTGTAGAAGGGCTTGCAGTAGGTGCTGCAGCTGCAGTTTCATTCACTACTAAAGTTCCTGTTCTAGCTTC AGCTTATAGGAAGTCTCGTTCTGGAAGTGGTTCCGGAGCATGGATTTCAGGAGCTCTCGCTCTTCCTGCTGCAGCTTACATGCTCCAAGATCAGGAGGTG CATGCTGCAGAGCTGGAGCGTACCTTCATTGCTATTAAGCCTGATGGAGTGCAGAGAGGACTGGTAAAGTAAAACTAGATTGCACTTCCTCCTCATGTTT GGTTTTTCATGTTATTATCCTCAACTTGGATAACTTTATATGTTCTGAGATGTTTCTTTTGCAGATTTCAGAGATTATTTCACGTTTCGAGAGAAAAGGG TACAAGCTCGTAGGAATTAAAGTACTGACTCCTTCGAAGGAATTTGCCCAGAAGCATTATCATGACCTAAAGGAAAGACCCTTCTTTGGTGAGCTATGTG GATTCCTAAGCTCTGGTCCTGTTATTGCAATGGTAAGAATTTACCAATCTCTTGTTTTAGGGATTGAAAACAAACACCAGATGTTCATAATCAATCCTAT TTCCCCAAAAAAATTGATGTCACAGGTTTGGGAAGGACAGGGAGTTATAGTGTATGGCCGGAAACTAATCGGAGCCACGGATCCACAGAAATCAGAGCCC GGAACTATCAGAGGTGATCTTGCTGTTAATGTTGGAAGGAACCAAAAAGCAAAAAGTGGCCCCGTCAGGCTCCTCTCCATTGGCAGTAATAGTTTTTGGT GCATTTTTAGGGATAAAATTGTAATTACAATATAAACAAAAGAGCACAAATGTAATTGGATAGGGATCCTCTCTAGCACTGGCAAAAAAAATTTCAACAG TCATTATTTTATATCATTTTTGAATAAAAATAAATAAATAATACTTGAAAAAATATCATTTCAACATATTTTAGTAATGAGCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41518; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196642
| Blastp | Nucleoside diphosphate kinase III, chloroplastic/mitochondrial from Arabidopsis with 67.46% of identity |
|---|---|
| Blastx | Nucleoside diphosphate kinase III, chloroplastic/mitochondrial from Arabidopsis with 67.46% of identity |
| Eggnog | Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity)(COG0105) |
| Kegg | Link to kegg annotations (AT4G11010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444629.1) |
| Pfam | Nucleoside diphosphate kinase (PF00334.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |