| Id Trinity | FTRINITY_DN54309_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_197427 |
| Sequence | CTTATATATACTCTCTAAGGTAAACCACTGCCTTTCTAAATTCTCTTCCCCCTTTCTCTCTTTATACAGCCACCACCTAATAAGAATCACCGCAGTGGAA CAGCCTAAAAACTTAGCATCAGGTTCATATATTCCCATCCCAGACCAGTTACCAGTTAGTTAACTAACTTTCCCCCTTCTCTTCTCCCCGTTTTACCCTT CTCCCACTTCCTCATTTTCCATCCTCACACCCTCTCATCAAAATGATAACTTGGAACGATTTATACAGTGTCTTAACTGCAGTGGTTCCACTCTACGTGG CAATGATCTTAGCATACGGTTCCGTACGGTGGTGGAAAATATTCTCGCCGGACCAATGCTCCGGCATAAACCGTTTCGTCGCGATATTCGCGGTTCCATT ACTTTCCTTCCACTTCATCTCCACCAACAACCCTTACGCCATGAACTTCAGATTCATCGCCGCCGATACGCTTCAGAAGATCATCATGCTTTTCGCACTT GCTATGTGGACTAACTTCACCGCCAACGGTAGCCTCGAATGGATGATTACAATTTTCTCTCTTTCAACATTGCCTAACACGTTAGTCATGGGAATTCCTC TCTTAATCGCCATGTACGGCGATTATTCTGGCAACCTCATGGTTCAGGTGGTGGTGCTCCAGTGTATTATATGGTACACGCTCCTATTGTTTCTTTTCGA GTACCGTGGCGCGAAGTTACTAATCATGGAACAGTTTCCAGAAACTGCAGCGTCGATCGTGTCTTTCAAGGTTGACTCTGACGTCGTTTCGCTTGACGGT AGGGATTTTCTTGAAACCGATGCTGAGGTTGGCGACGACGGGAAACTTCACGTCACTGTTAGAAAATCAAACGCGTCGCGAAGATCGTTTATGATGACTC CACGGCCGTCGAATCTCACCGGAGCTGAGATTTACAGCATGAGCTCTTCACACAATCCTACGCCACGTGGCTCTAACTTCAACCACGGTGATTTCTACTC CATGATGGGGTATCAAGCAAGGCATTCGAATTTTGGTGCGACGGATTTGTATTCTGTTCAGTCCACGTCGCGTGGGCCCACACCACGGCCATCGAATTTT GAAGAGAACGGTGCAGCAATGGGTCAGAATATGAGTTCACCCAGGTTCGGGTTTTACCCAGCACAAACCATGCCGGCATCTTATCCAGTTCCAAATCCAG AATTCTCATCCAGTTTTAGTAAAAGTGTTAAAAACTCGCAACCACAAACACAACCGCAACCACAAGTAGTACAAAATAGTACTAAATCGAGTCATGACGC GAAAGAGCTCCACATGTTTGTGTGGAGCTCGAGTGCGTCACCAGTTTCGGAAGGTACTGGCCTCCACGTATTCAGCGGTGCCGATTTAGGAGCATCCGAT CAAGGTGCTAAAGAGATAAGGATGGTGGTAGCAGAAGAAAATCCTCAAACTGAAGCCAATAAAGTTATAACGGAAGCAGAGTTTGTTGCGGAAGAGTTGA AATTTCCCACGAATGAAACAGAACACGCAGAGGAATTGGAAGGAGAGAAAGAAGGACCCAATGGACATAACAAGCTAGGTTCAAATTCAACGGCGGAGCT ACACCCGAAAGCCGCTGCAGCCGCCGGGACTGGCATGACAAAATATATGCCTCCGGCGAGTGTTATGACCCGTCTCATACTCATCATGGTATGGAGAAAG CTTATCCGCAACCCCAACACATACTCAAGCCTCATTGGTGTCATTTGGTCCCTCGTTGCCTTTAGGTGGCATGTGCATATGCCCAAAATAATAGAGAAAT CAATCTCCATATTGTCTGATGCAGGTCTTGGAATGGCTATGTTCAGCTTAGGTCTGTTTATGGCTCTTCAGCCAAAAATGATAGCTTGTGGGAACTCAGT TGCTACATTTGCCATGGCTGTTCGATTCTTGACCGGTCCAGCCGTCATGGCAGCAGCTTCCATCGCTGTTGGCCTTCGTGGCAATCTCTTACGCATAGCC ATTGTTCAGGTAATTATAAGTGATTAACATAATATATAGCTCTACCCTCTGCTTGTTCCTTGTTTCGTTCATATTAAATTAAATAAAGAGAAAAATATAT ATCCACTGGAAATATAATTTTTTTTATAAACTATCATAAGTGTAGCCCATTATCTATATAACTTATTTTCCATCATTAATCTAAAAACACCATGTGAAAA AATTGAAAATCACGTTGATATTTTACATGCATCCATTATTTTTATATCTTGGAAGGCTTAAAATATAGAAATTTTGAATGATTAGAAACCTAATGGCTCT GTTTTGTGTACTGTATATAACCGTAATGATATTTATGCCCATGATTTTATCACACTAAATATTTTAAAAACTTGTAATTGTTAAAAACAGGCTGCACTTC CACAAGGAATTGTTCCATTTGTATTTGCAAAGGAGTACAATGTCCATCCAGCCATTCTTAGCACAGCGGTTATATTTGGGATGTTGATAGCACTACCAAT TACTCTAGTCTACTACATACTACTTGGCTTGTAAATTTATACTATACAGTATTAAGTAGTAGACAAAGACAGGAGATTGAAGAATGATCCTTTTCAACCT TTTATTCTCTGAGTTAACATGCATGCACAGGGACCACATTGGATTGTGCTGTTATTAGCAAGGATGGGGATTTTCTGAATGATTTACAAACTACTAGTCT CCTTAAAACAGAGGGTATCCTACAAAGTTTCCAAATTTTGGGAAACGTAAGAAAATTTGACCTACTGGCCAAAATTCCTATGATCCTAATACCTATATTA TTAAGTTCCAAGTGACACAATTCTCAAGAACCTCAGAGAAAGAGGAACAAGTACAGTGTATTGGAGACACGACAGAGAAAAGCAGGGTGAAGCTAACATA AACAGAGGCAATTGTACCTAGAAAAATTGGTTCCCTACGTATCTGCTTTGTAAATTTTATTAGTCGTGTCTGGGTCATGTTCAGCAATAGAAGATATTAA ATTGGAATATTGAAGGAAGGACTTTTTTCCTCTAAATCTTGTGTTTACTTTATACTTTTAAATTAATCATATTATTATTATTGGTGTATGTTCTGTCTTT TATCGTCCTCGGATCCAGCAATTATTTGCTTTTGTCGTCTTTTCTGGTTGGCATGATTTGAAGAGAAAACTATGTACAATAAATTGTTAAATTATCACTC TAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41528; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197427
| Blastp | Auxin efflux carrier component 3 from Arabidopsis with 72.79% of identity |
|---|---|
| Blastx | Auxin efflux carrier component 4 from Arabidopsis with 68.77% of identity |
| Eggnog | auxin efflux carrier(ENOG410Y9XE) |
| Kegg | Link to kegg annotations (AT1G70940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (NP_001316762.1) |
| Pfam | Membrane transport protein (PF03547.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |