| Id Trinity | FTRINITY_DN54309_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_197417 |
| Sequence | CTTATATATACTCTCTAAGGTAAACCACTGCCTTTCTAAATTCTCTTCCCCCTTTCTCTCTTTATACAGCCACCACCTAATAAGAATCACCGCAGTGGAA CAGCCTAAAAACTTAGCATCAGGTTCATATATTCCCATCCCAGACCAGTTACCAGTTAGTTAACTAACTTTCCCCCTTCTCTTCTCCCCGTTTTACCCTT CTCCCACTTCCTCATTTTCCATCCTCACACCCTCTCATCAAAATGATAACTTGGAACGATTTATACAGTGTCTTAACTGCAGTGGTTCCACTCTACGTGG CAATGATCTTAGCATACGGTTCCGTACGGTGGTGGAAAATATTCTCGCCGGACCAATGCTCCGGCATAAACCGTTTCGTCGCGATATTCGCGGTTCCATT ACTTTCCTTCCACTTCATCTCCACCAACAACCCTTACGCCATGAACTTCAGATTCATCGCCGCCGATACGCTTCAGAAGATCATCATGCTTTTCGCACTT GCTATGTGGACTAACTTCACCGCCAACGGTAGCCTCGAATGGATGATTACAATTTTCTCTCTTTCAACATTGCCTAACACGTTAGTCATGGGAATTCCTC TCTTAATCGCCATGTACGGCGATTATTCTGGCAACCTCATGGTTCAGGTGGTGGTGCTCCAGTGTATTATATGGTACACGCTCCTATTGTTTCTTTTCGA GTACCGTGGCGCGAAGTTACTAATCATGGAACAGTTTCCAGAAACTGCAGCGTCGATCGTGTCTTTCAAGGTTGACTCTGACGTCGTTTCGCTTGACGGT AGGGATTTTCTTGAAACCGATGCTGAGGTTGGCGACGACGGGAAACTTCACGTCACTGTTAGAAAATCAAACGCGTCGCGAAGATCGTTTATGATGACTC CACGGCCGTCGAATCTCACCGGAGCTGAGATTTACAGCATGAGCTCTTCACACAATCCTACGCCACGTGGCTCTAACTTCAACCACGGTGATTTCTACTC CATGATGGGGTATCAAGCAAGGCATTCGAATTTTGGTGCGACGGATTTGTATTCTGTTCAGTCCACGTCGCGTGGGCCCACACCACGGCCATCGAATTTT GAAGAGAACGGTGCAGCAATGGGTCAGAATATGAGTTCACCCAGGTTCGGGTTTTACCCAGCACAAACCATGCCGGCATCTTATCCAGTTCCAAATCCAG AATTCTCATCCAGTTTTAGTAAAAGTGTTAAAAACTCGCAACCACAAACACAACCGCAACCACAAGTAGTACAAAATAGTACTAAATCGAGTCATGACGC GAAAGAGCTCCACATGTTTGTGTGGAGCTCGAGTGCGTCACCAGTTTCGGAAGGTACTGGCCTCCACGTATTCAGCGGTGCCGATTTAGGAGCATCCGAT CAAGGTGCTAAAGAGATAAGGATGGTGGTAGCAGAAGAAAATCCTCAAACTGAAGCCAATAAAGGTAATAATGTACACGAGTTTTTCAAAATCAAAACAA ATCTTGTTTAATGAATTAATATGATTTGGTGATCGTGTGATGATTAATTCAAAACTGAAGTTATAACGGAAGCAGAGTTTGTTGCGGAAGAGTTGAAATT TCCCACGAATGAAACAGAACACGCAGAGGAATTGGAAGGAGAGAAAGAAGGACCCAATGGACATAACAAGCTAGGTTCAAATTCAACGGCGGAGCTACAC CCGAAAGCCGCTGCAGCCGCCGGGACTGGCATGACAAAATATATGCCTCCGGCGAGTGTTATGACCCGTCTCATACTCATCATGGTATGGAGAAAGCTTA TCCGCAACCCCAACACATACTCAAGCCTCATTGGTGTCATTTGGTCCCTCGTTGCCTTTAGGTGGCATGTGCATATGCCCAAAATAATAGAGAAATCAAT CTCCATATTGTCTGATGCAGGTCTTGGAATGGCTATGTTCAGCTTAGGTCTGTTTATGGCTCTTCAGCCAAAAATGATAGCTTGTGGGAACTCAGTTGCT ACATTTGCCATGGCTGTTCGATTCTTGACCGGTCCAGCCGTCATGGCAGCAGCTTCCATCGCTGTTGGCCTTCGTGGCAATCTCTTACGCATAGCCATTG TTCAGGTAATTATAAGTGATTAACATAATATATAGCTCTACCCTCTGCTTGTTCCTTGTTTCGTTCATATTAAATTAAATAAAGAGAAAAATATATATCC ACTGGAAATATAATTTTTTTTATAAACTATCATAAGTGTAGCCCATTATCTATATAACTTATTTTCCATCATTAATCTAAAAACACCATGTGAAAAAATT GAAAATCACGTTGATATTTTACATGCATCCATTATTTTTATATCTTGGAAGGCTTAAAATATAGAAATTTTGAATGATTAGAAACCTAATGGCTCTGTTT TGTGTACTGTATATAACCGTAATGATATTTATGCCCATGATTTTATCACACTAAATATTTTAAAAACTTGTAATTGTTAAAAACAGGCTGCACTTCCACA AGGAATTGTTCCATTTGTATTTGCAAAGGAGTACAATGTCCATCCAGCCATTCTTAGCACAGCGTAAGAAATTTAACTTCTTTAACATATTTTCTTACTC ATTATTTCTCTTAAGTGATAAATTGGTTCATTTTCTCAAATGTACAAATTTAATTTAATTGCAGGGTTATATTTGGGATGTTGATAGCACTACCAATTAC TCTAGTCTACTACATACTACTTGGCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41528; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197417
| Blastp | Auxin efflux carrier component 4 from Arabidopsis with 86.07% of identity |
|---|---|
| Blastx | Auxin efflux carrier component 3 from Arabidopsis with 66.47% of identity |
| Eggnog | auxin efflux carrier(ENOG410Y9XE) |
| Kegg | Link to kegg annotations (AT2G01420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (NP_001316762.1) |
| Pfam | Membrane transport protein (PF03547.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |