| Id Trinity | FTRINITY_DN54314_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_195403 |
| Sequence | CTTGAACCAACACTCGGTGAGAAATGTAAACACACACTCTCTCTTTCTTCGTAATAGAACTACAGAAGGACACAAACACACACACACTCTCTTTCTTAAA ACCCTTTGGTTCCAATTTTTTGTAACCGCAATGGCTGCTAGCATCGACATGTCTCTCGACGACATCATCAAGCGATCCACCACCGCCACCGCCACCGCCT CCGCCTCTCGCCGCCGTCCCAGGGATAGACCCCACGGTCCAGGTCCCGATCGCCGCTTCGAACTTCGCAAACCGGCCAAAACGACACCGTATTTCATCCC GCAGGAAAGAACATTAGTGTCTAGGAAAGTGTTGCAACCGAATTTGATTGTTCCGGAAATGGGTTTTGATGGAAATGGTGTTGATGCTGAGATTGATACT GAATCTGTACTTTACATATCCAACTTGCATTCTGAGGTTACTAACTATGATATTAAGTTGCTCTTCTCTGAAGTGGGTGACTTGAAAAGATACTGCATCC ATTATGACAAGAACGGGAAATCAAAAGGGACTGCAGAAGTTGTATTCGCGAGGCGTTCTGATGCTTTAGCAGCCATAAAGAAATACAACAATATGAAGCT TGATGGGAAACCATTGCAAATTGAGCTTGTTGGAACATCCTCAGTTACTCCTCCTGTTATTCCTCCTTTTCAAAGTAGCGTATTGGGACCAATACCAAAT GATGGCCGTGTAAGGTTATCTTCATTTTCGGGTTTGGTAACTCCTGATGTTATGCCCCCTTTTCAAAGTAGCTTACTAGGACCAATACCAAATGATGGCC GTAGAAGGTTCCACAATGGCTTTGCACATGGCCGTCTTCCAAGGGGCCCTGGAGAAGGGAAAGCTCTTACCAGAAAGGTATCTGCTAGAGATCTCGATGA AGACTTGGAGAGGTATCGGCGCTTTTCAAAGGGAAATGGGCAAGCGAAGGGTCATGCCGGAAAGGTATCTGCTAGAGATCTTGACGATGACTTGGAGAGG TATCACTCACAAGCTATGCAGATAAAAAACAAAGAAAATGAAAAGTGAGTTCATGGTTGATAGCTAGAAAATGACTCATATTCTGAGTAAATAGGTCAGA AGCACTAAGTACAGGATTATGGTAAATGTGCCTGTGGTTCTGATTTACAATTTTAGCCGCAAGAGTTTACTCCTACTGCATATATCAGTATGCTATTTGT ACATCTTAGATTCAAAACATTCTACTGATTTTGTATCTCATTGCTTCAAACCCATATGCACTATATAAAGATTATTCATGGACCATGGGTAACCTTAGTG CGAAAGAATCGAAATTTCCATGAAATGTTGCTTGGATAGTGAAATAGGAAGTAGGTAAATATTGCCATGTATTAGATATATTGTTAGCTGAATTAGCTCT GTTCTAATTTATGAATAAACTCTCAAGTGGCTTATGGCTACTTCATATATAGGAAGGGGATATACTTACTCTAGGAGTAAGTTAAAAACCTCTACTTCTT ATCTTAGCCATCCATTCCATGAAAATCTAATGGTTCAGATCTACCGACTAATTCAAATTATGTGAATCATTAAATTTTCATAGAATGAATGACTAAGATA TGGAGTAGTTTTTTTTTAACTTCAGGAATAAGCGAATCTCCTTTCATATATATACAAATTAGGGAAACCTTTTCGAAATTTGCTTATTCTTTGCTGTCAT AGGCTGTTATTGTTTCAGCCTTATTCATTCAAGCATAAGGATTTGAATTGCTGAATAAGCATATTTGTACTGCATGGATCTTTAGTCTCTAAGGCTGGTT AATGCAATTAAGGTGATACATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41578; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_195403
| Blastp | THO complex subunit 4A from Arabidopsis with 39.68% of identity |
|---|---|
| Blastx | THO complex subunit 4B from Arabidopsis with 41.83% of identity |
| Eggnog | Polymerase (DNA-directed), delta interacting protein 3(ENOG4111JAW) |
| Kegg | Link to kegg annotations (AT5G59950) |
| CantataDB | Link to cantataDB annotations (CNT0001769) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451709.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |