Ll_transcript_196481

Id TrinityFTRINITY_DN54320_c0_g2_i10
Name TranscriptLl_transcript_196481
SequenceGAGCTGTTGAGTGCTACCAGCGCCAAATTAAAAAAATAGGTTGCAATTTGAAGGGCATTATCGTCCCGTCAAGAATTCGTCATTTCCTACATCTATTTTT CAACGGCGACACTGAGCTGAAAACTGAAGACTCTCTTTCCTAACTTTTCTTTCTCTTTCATCGTTTCCGAACCGGGCCGAACCGAACCGAACCGAACCGA GCTAGACCATGGGAGTGCCAGCGTTTTACCGGTGGCTCTCGGACCGGTACCCGCTCTCCATCACCGACGTTGTGGAAGAAGAGCCCGCCGACGGCGGCGG CAGCGTTCTGCTGCCGATTGATGTGTCTAAACCTAATCCCAACGGCATAGAGTTTGACAACTTGTACTTGGATATGAACGGTATAGTTCACCCTTGTTTT CACCCTGATGGCAAGCCTGCTCCTGCTACCTATGATGACGTATTCCAATCAATATTTGATTACATTGACCACATCTTTTCGTTAGTTCGTCCAAGGAAGC TTCTCTATCTTGCTATTGATGGTGTTGCACCAAGAGCCAAAATGAATCAGCAGCGTTCTCGGCGCTTCCGAGCAGCAAAAGATGCAGCTGATGCTGAAGC CGAAGAGGAAAGGCTGAGGAATGAATTTGAGGGTGAAGGACAACTTTTGCCCGCTAAAGAGAAGCCTGAAACATATGACTCAAATGTCATTACCCCTGGC ACTCAATTTATGGCAAAACTGTCAGTGGCACTTAAGTCTTATGTACAGACTAGATTGAATGACAATCCTGGATGGAAGAATATAAAGGTTATACTTTCTG ATTCAAATGCACCTGGTGAGGGCGAACATAAAATAATGGAATACATCCGGTTACAACGCAACCTTCCTGGTTCCGATCCTAATACTCGACATTGTTTGTA TGGGTTGGATGCTGATTTGATTATGCTGTCCTTAGCTACACATGAGGTTCATTTCTCAATACTGAGGGAGGTAATTACTTTACCCGGACAACAGGACAAG TGTTTTCTGTGTGCCCAAGTTGGCCATTTTGCAGCTGATTGTCCCGGTAAACCTGGCACTGAAGACAAGGACCAGAGTTCTGCTGATGATACCCCAATTC ACAAGAAGAAATACCAGTTTCTTAACATCTGGGTGCTGCGCGAATATTTGCAATACGAATTGGAGATTCCGAATCCTCCTTTTGTGATTGACTTTGAACG ATTAGTGGATGATTTTGTGTTTCTATGCTTCTTTGTTGGCAATGACTTTCTTCCACATATGCCAACACTAGAGATCAGGGAGGGGTCTATAAATTTATTG ATGCACATATATAGAAAGGAATTTACTACCATGGGTGGTTATCTTACTGATGCGGGTGAGGTTTTCCTAGACAGAGTGGAACATTTTATTCAGTCCGTTG CTGTTCATGAAGATCAAATATTTCAGAAACGTGTTCGGATTCAGCAGGCTGCGGAAATTAACGAACAGATGAAAGCTAGGTCAAGAGGAGAAATGCCTGT AGAGCCACGTACCTCAATTGTGGATAAGGTTAAGTTCGGGGAGCCTGGATACAAGGAAAGGTATTATGCTGAAAATTTTGGTGTATCAAATCCAGAGGAG ATTGACAAAATTAAGAAAGATATAGTAAGTTGTATACATTTTTCTGACAGTGAACCGTGCTGTAAGTTGGTCTTTAAATCTTCATCTAACCCCTTTGCCT GTGTTCCAGAGGAGGAAAGGGAGTGTGCTCATGCACTCCAACAGTATTTTGTCGTCATATGGGTTAAGAAATGTTCATCCTGTGTAAATAAAGTTCAATT TTACACCAGTGAATAATTTTTTATAGGACAAATATGTCCGCTGTTAGATCAAAATAAGCATCATATATATTCTTAGTATTGTTATATGGCTTTGTTGATT TTGAATAGGTTAATTACTTTTTGGTTCTTGTACAACAAACAAGCCTTAGTCATTGTAGTTTCACTGGATTTTTAAATACGCCCCTACGGTTCAAAAGTTT TTAATCAGGTACCTATACTTCAAATAAGTTTTGAACAAGTCCCTACCAGCACAAGTTTTAGGGACTTGATTACAAAAATTCTATAATAAGTGGGGATTCA GTTAAAAGCTTTAGACTATAGTGACTTCTTTAAAAATAGAGTGAAGGGATAGGGACCATAAGATTAATTTAACCTTGTAACTTGTAAGTATTTTGCTTTC TGGTGATAATTATCCTACTCAACGTCATTAATTTCTGGCTATTAGCCAAATAAATATTATGTTAGACGACAGCTTATTGCCTTAGTTGTCCCTGTAGGTC TTGAAGTATGTGGAAGGCCTTTGTTGGGTTTGCTGGTATTACTATCAGGGTGTCCGCTCGTGGAAATGGTTCGTGATATTTTTTGTTATTAGCTGTAGAT TTTATTTGTTCAACATTTCCTTCTTTTTTCTGGTTTCGTGATTGACTTGCTAAGGTGGTACATTTACATGCAAGATATACTGTTTTGTTTGAATTCATGC TGATAAGTGAAGTTGCCCCACTGTTGATCGCCCAGAAGATCAAACTCAACTAACTGGATGTATTGTAGGGCTACAAAGCTGTTCATCTGGATGTTTTGTT TTCATTATGCTTTATTTCTTTGCTTTAAGATTTCCTAGGGTAATGGGTGGGCATGAATTAAGATGATATTAATATTATAATTCTTCACTCGGCAGATGTC AATACAGTGAAAATTATGGGTTCGTTCTTTTTCTCATGGATGTATTAACTTAATTGAGTGTAATTTGATGGATGACTTGGTCTGCATCTGTTCTTGTTTA AGCAAAAATATCCTGCCTCTTTATATTATGTTGAACTTCAGTGCTACGCTTCATGACTTATAAGTTTCATTGAATACTACAACAATCCCAAAGATGGTTG CCAGATGGAATTTATCAATGTGATTTAACAAAAGACAATTTCGGCTGGATACCTTGATGACTAGGATATAGGCTCTGGTGTCTGAGGTGCTTTAAGATGA TTGATCTATATTGCTAGGAGTTCCCTTCATTTTAGTTGAATTATCACCCATAACTATTGTTCAATTTGCTCACTATCACTAATGATTTTTAATTGCTTCT GTAGGTACTACCCCTACCATTATGCTCCCTTTGCTTCTGATCTTAAAGATCTAAGTGATCTGGATATTACATTTTCTGAGGGAGAGCCATTCAAACCATT TGATCAGCTCATGGGTACCCTTCCTGCTTCAAGGTTTCTTACCCTATCCTGCCCTTATATCTTTCATACCATACTTCCTCGGCTGATACTATTTTATTGT AACAGTTCGAGTGCATTGCCAGCAAAATATAGGGATTTGATGACTGACCCTTCCTCACCTATTTTTCACTTCTACCCTGCTGAGTTTGAGATCGATATGA ACGGCAAACGATTTGCATGGCAGGGTATTGCCAAGTTGCCATTCATTGATGAGAATAAATTGCTTGCCGCCACAAGGAAGCTTGAAAACACATTAACGGA GGAAGAACAACGTCGGAATAGTGTGATGCTTGAATCTCTTTTTGTCAACCGTGCACATGGTTTGGCTCCGCAAATCTTATTGTATTACAAAGTTTGTAGT CAATCACCCCCACATGAAAGAGATGTTTGCCCTATTGACTCAAATGCTAGTGGTGGGATGAACGGATATCTTTGGTTATGCGATCCTTTACCTTTCGCAA TCAATGGATGGCAAGATATTGAGAGTAACCAAGTCTTAAATATTATATATCGTAATCCTCATAAACATAGACATAACCCAAAACCTCCTGTTGGTGTAGT AATGCCCAAAAAGTTAATAAAATCCATTGATATTAAACCTAGTCCTGTGCTATGGCATGAAGACAATTCTGGTCGGAGACAGCAAGGCAGAGAAAGGCCA CAAGTACCTGGAGCAATAGTTGGCTGTCAACTGGGAGAAGCAGCTCATCGTCTTATCAAGAACGCCCTTAACATTAAACTGAATAATACATCTCATGGAT TGTTGGAGCAACAACCTCCAGGCCATCATATAGGGAACAGGCTTCAATCAGCAGGACCCTCTGGACACAGAAATTATCATGGCGGACAGAATTACAGACA AAATTTTAGGATACAAGACAGGTCACAGCATCAAGAACATATCCACAATGTGAAGTCTGGGTTTTCTGATTTAACAAAGGAGGATGGAGTGAGAACTACG CCATCGAGGCCGCAAAAGTCCAGGCCAGCAACCAATCCACGACACCAATTTGAGCAGAACACAAGAAAGTATTATGGCGAGAACTCAAATGGTTATTATG GACAACATAATCAGCAGGGCGCAGTTTTCAGACCCAAATATCCGATCTCTACTAATGGTGGACAGAATTATAGACAAAATTTTAGGATACAAGAGAGGTC AGAAGAACAGATCCACAATGTGAAGACTGAGTTTTCTGCTTTAACAATGGAGGAAGGAGTGAGAACTAGGCCATCGAAGCCGCCAAATTCCAGACCAACA ACCAATCCACAACACCAATATGTGCAGAACATTGGTCCTCCAGTATCACCAAAGGTGATTACTAAAGCACCAATACCACCAAAGGTGATTACTAAAGCAC CAATACCACCAAAGGTGATTACTAAAGCACCAATACCACCAAAGGTGATTACTAAAGCA BLAST
Tissueflowers
Gene nameLI_gene_41605; 
Additional informationdetails; 

Expression of Ll_transcript_196481

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_196481

Blastp5'-3' exoribonuclease 4 from Arabidopsis with 78.57% of identity
Blastx5'-3' exoribonuclease 4 from Arabidopsis with 78.57% of identity
Eggnog5'-3' exoribonuclease(COG5049)
KeggLink to kegg annotations (AT1G54490)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452219.1)
PfamXRN 5'-3' exonuclease N-terminus (PF03159.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;