Ll_transcript_196464

• Id Trinity: FTRINITY_DN54320_c0_g2_i3
• Name Transcript: Ll_transcript_196464
• Sequence: GAGCTGTTGAGTGCTACCAGCGCCAAATTAAAAAAATAGGTTGCAATTTGAAGGGCATTATCGTCCCGTCAAGAATTCGTCATTTCCTACATCTATTTTT CAACGGCGACACTGAGCTGAAAACTGAAGACTCTCTTTCCTAACTTTTCTTTCTCTTTCATCGTTTCCGAACCGGGCCGAACCGAACCGAACCGAACCGA GCTAGACCATGGGAGTGCCAGCGTTTTACCGGTGGCTCTCGGACCGGTACCCGCTCTCCATCACCGACGTTGTGGAAGAAGAGCCCGCCGACGGCGGCGG CAGCGTTCTGCTGCCGATTGATGTGTCTAAACCTAATCCCAACGGCATAGAGTTTGACAACTTGTACTTGGATATGAACGGTATAGTTCACCCTTGTTTT CACCCTGATGGCAAGCCTGCTCCTGCTACCTATGATGACGTATTCCAATCAATATTTGATTACATTGACCACATCTTTTCGTTAGTTCGTCCAAGGAAGC TTCTCTATCTTGCTATTGATGGTGTTGCACCAAGAGCCAAAATGAATCAGCAGCGTTCTCGGCGCTTCCGAGCAGCAAAAGATGCAGCTGATGCTGAAGC CGAAGAGGAAAGGCTGAGGAATGAATTTGAGGGTGAAGGACAACTTTTGCCCGCTAAAGAGAAGCCTGAAACATATGACTCAAATGTCATTACCCCTGGC ACTCAATTTATGGCAAAACTGTCAGTGGCACTTAAGTCTTATGTACAGACTAGATTGAATGACAATCCTGGATGGAAGAATATAAAGATCTGGCTTTCAG GAAACTTTGTATCTATATATTTATTTATTGGACTGCATTGGGTAATTATTTAAAGGTTATACTTTCTGATTCAAATGCACCTGGTGAGGGCGAACATAAA ATAATGGAATACATCCGGTTACAACGCAACCTTCCTGGTTCCGATCCTAATACTCGACATTGTTTGTATGGGTTGGATGCTGATTTGATTATGCTGTCCT TAGCTACACATGAGGTTCATTTCTCAATACTGAGGGAGGTAATTACTTTACCCGGACAACAGGACAAGTGTTTTCTGTGTGCCCAAGTTGGCCATTTTGC AGCTGATTGTCCCGGTAAACCTGGCACTGAAGACAAGGACCAGAGTTCTGCTGATGATACCCCAATTCACAAGAAGAAATACCAGTTTCTTAACATCTGG GTGCTGCGCGAATATTTGCAATACGAATTGGAGATTCCGAATCCTCCTTTTGTGATTGACTTTGAACGATTAGTGGATGATTTTGTGTTTCTATGCTTCT TTGTTGGCAATGACTTTCTTCCACATATGCCAACACTAGAGATCAGGGAGGGGTCTATAAATTTATTGATGCACATATATAGAAAGGAATTTACTACCAT GGGTGGTTATCTTACTGATGCGGGTGAGGTTTTCCTAGACAGAGTGGAACATTTTATTCAGTCCGTTGCTGTTCATGAAGATCAAATATTTCAGAAACGT GTTCGGATTCAGCAGGCTGCGGAAATTAACGAACAGATGAAAGCTAGGTCAAGAGGAGAAATGCCTGTAGAGCCACGTACCTCAATTGTGGATAAGGTTA AGTTCGGGGAGCCTGGATACAAGGAAAGGTATTATGCTGAAAATTTTGGTGTATCAAATCCAGAGGAGATTGACAAAATTAAGAAAGATATAGTAAGTTG TATACATTTTTCTGACAGTGAACCGTGCTGTAAGTTGGTCTTTAAATCTTCATCTAACCCCTTTGCCTGTGTTCCAGAGGAGGAAAGGGAGTGTGCTCAT GCACTCCAACAGTATTTTGTCGTCATATGGGTTAAGAAATGTTCATCCTGTGTAAATAAAGTTCAATTTTACACCAGTGAATAATTTTTTATAGGACAAA TATGTCCGCTGTTAGATCAAAATAAGCATCATATATATTCTTAGTATTGTTATATGGCTTTGTTGATTTTGAATAGGTTAATTACTTTTTGGTTCTTGTA CAACAAACAAGCCTTAGTCATTGTAGTTTCACTGGATTTTTAAATACGCCCCTACGGTTCAAAAGTTTTTAATCAGGTACCTATACTTCAAATAAGTTTT GAACAAGTCCCTACCAGCACAAGTTTTAGGGACTTGATTACAAAAATTCTATAATAAGTGGGGATTCAGTTAAAAGCTTTAGACTATAGTGACTTCTTTA AAAATAGAGTGAAGGGATAGGGACCATAAGATTAATTTAACCTTGTAACTTGTAAGTATTTTGCTTTCTGGTGATAATTATCCTACTCAACGTCATTAAT TTCTGGCTATTAGCCAAATAAATATTATGTTAGACGACAGCTTATTGCCTTAGTTGTCCCTGTAGGTCTTGAAGTATGTGGAAGGCCTTTGTTGGGTTTG CTGGTATTACTATCAGGGTGTCCGCTCGTGGAAATGGTACTACCCCTACCATTATGCTCCCTTTGCTTCTGATCTTAAAGATCTAAGTGATCTGGATATT ACATTTTCTGAGGGAGAGCCATTCAAACCATTTGATCAGCTCATGGGTACCCTTCCTGCTTCAAGTTCGAGTGCATTGCCAGCAAAATATAGGGATTTGA TGACTGACCCTTCCTCACCTATTTTTCACTTCTACCCTGCTGAGTTTGAGATCGATATGAACGGCAAACGATTTGCATGGCAGGGTATTGCCAAGTTGCC ATTCATTGATGAGAATAAATTGCTTGCCGCCACAAGGAAGCTTGAAAACACATTAACGGAGGAAGAACAACGTCGGAATAGTGTGATGCTTGAATCTCTT TTTGTCAACCGTGCACATGGTTTGGCTCCGCAAATCTTATTGTATTACAAAGTTTGTAGTCAATCACCCCCACATGAAAGAGATGTTTGCCCTATTGACT CAAATGCTAGTGGTGGGATGAACGGATATCTTTGGTTATGCGATCCTTTACCTTTCGCAATCAATGGATGGCAAGATATTGAGAGTAACCAAGTCTTAAA TATTATATATCGTAATCCTCATAAACATAGACATAACCCAAAACCTCCTGTTGGTGTAGTAATGCCCAAAAAGTTAATAAAATCCATTGATATTAAACCT AGTCCTGTGCTATGGCATGAAGACAATTCTGGTCGGAGACAGCAAGGCAGAGAAAGGCCACAAGTACCTGGAGCAATAGTTGGCTGTCAACTGGGAGAAG CAGCTCATCGTCTTATCAAGAACGCCCTTAACATTAAACTGAATAATACATCTCATGGATTGTTGGAGCAACAACCTCCAGGCCATCATATAGGGAACAG GCTTCAATCAGCAGGACCCTCTGGACACAGAAATTATCATGGCGGACAGAATTACAGACAAAATTTTAGGATACAAGACAGGTCACAGCATCAAGAACAT ATCCACAATGTGAAGTCTGGGTTTTCTGATTTAACAAAGGAGGATGGAGTGAGAACTACGCCATCGAGGCCGCAAAAGTCCAGGCCAGCAACCAATCCAC GACACCAATTTGAGCAGAACACAAGAAAGTATTATGGCGAGAACTCAAATGGTTATTATGGACAACATAATCAGCAGGGCGCAGTTTTCAGACCCAAATA TCCGATCTCTACTAATGGTGGACAGAATTATAGACAAAATTTTAGGATACAAGAGAGGTCAGAAGAACAGATCCACAATGTGAAGACTGAGTTTTCTGCT TTAACAATGGAGGAAGGAGTGAGAACTAGGCCATCGAAGCCGCCAAATTCCAGACCAACAACCAATCCACAACACCAATATGTGCAGAACATTGGTCCTC CAGTATCACCAAAGGTGATTACTAAAGCACCAATACCACCAAAGGTGATTACTAAAGCACCAATACCACCAAAGGTGATTACTAAAGCACCAATACCACC AAAGGTGATTACTAAAGCA
• Tissue: flowers
• Gene name: LI_gene_41605;
• Additional information: details;

Expression of Ll_transcript_196464

FPKM

• FPAB: 0.1
• FPNAB: 0.6
• LF1: 0.1
• LF2: 0.2
• LF3: 0.4
• LF4: 0
• UF1: 0.2
• UF2: 0
• UF3: 0
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_196464

• Blastp: 5'-3' exoribonuclease 4 from Arabidopsis with 45.48% of identity
• Blastx: 5'-3' exoribonuclease 3 from Arabidopsis with 68.38% of identity
• Eggnog: 5'-3' exoribonuclease(COG5049)
• Kegg: Link to kegg annotations (AT1G54490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452219.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;