Ll_transcript_196099

• Id Trinity: FTRINITY_DN54321_c0_g2_i2
• Name Transcript: Ll_transcript_196099
• Sequence: ATTATTAGGTTAAGCTGAGAAACGAAAAACAACTGCAATCATCGTCTTTAATCTCAGAGTTTGAAGAAATTGACAATGCCTCGCTACGAAGATAGATATG ACAATACTCGCCTCTATGTTGGTCGCTTGAACTCGAGGACACGCTCCCGCGATCTTGAGCGAGTCTTTAACAGATATGGAAGGTTTCTGGGGTATTTTTC CTAAACTTGGAGGTCTTTGGTGGGAGGGTGGCCTTGGTGGAATAAATTCCTGCCGAGTGTAGACTTTGGCGATTCTTTCTGTAGTGTTATTGCGTATTTT TATGGAAATGGCAACAAATCACAAACTGGTGTTTAGTTCGTCTTTGATGGTCGAAGTATCATGCACTTGCAGTAGTTAAGTAATGATGGCCTTACTGTTT CTGGAAATCATTTCCGCAGAGTTCGCAATGTGGATATGAAGCATGATTTCGCCTTTGTTGTAAGTTGTCAATCTTTCCCTGTTTATTTATTTATTTTTAC TTTGTTCACCTCATTCCTTTGCTCAAATGTCGGTTTTAGTATCTTCTTGGGGAATCCAGTTATAGATGATGGTAAGATTTGTGTTACTTTCCTAGCATGT TCTTTACATCTTCTGTACAGGAATTTAGTGATCCTCGAGATGCTGATGATGCAAGATATCACTTGGATGGTCGTGATTTTGATGGAAGTCGTCTTATTGT TGAGTTCGCAAAAGGGGTTCCTCGTGGTTCCCAGGCGCCTCGTGGTTCCCGGGAATATTTGGGGCGAGGTCCTGCTCCTGGATCTGGGCGCTGCTTTAAC TGTGGCCTTGACGGCCACTGGGCCCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTATCGCTGCGGGGAGAGAGGTCACATAGAAAAGAACTGCA AGAATAGTCCCAAAAAGTTGAGACGTGAAAGGAGTTATTCACGCTCACCAGTCAGGGGACGTTCTCCTCGTCGTGGCAGAAGCAGGGAGCGAAGCTACAG CCGAGACCGCAGCTACAGCCGATCAAGATCCCCTGTCCGTGAGCGCAGTCCTGTTCGTAAAGATAGATCAGAGAGTCCTCGCTACAGAAGCCCTGAACCC AAAAGTAGCCCTCTGCCCTCCAATGCAAGGAAGCATAGTCCATCACCTGACCGAGGTAGCCCACAGAAGAGCGGTGATATTTCTCCTGGTAATGATAGGT TGGCCATACAGCAAGACGGGTCTGACTACAGCGATGGTCCTAGAGAGAAGAGTGGAAGCCCTGCTAGCCCTGCAAGGGACCATGAAGATGACAGTCCTAG AGCTAATGGTGCTAGCCGTAGCCCTAGCCGCAGTCCCAGGGATGAGAGGAGCCCCATTGACAATGATGATGACAACCACCGCGGTTCCCCTAGAGGCAGT GAGTCACCTTAAGAAGTTTCTGATAAATGAACACAGGATGTGGGATTTATATGCTTTGTTTATTAAATGCACTTTATTTTGAACTGTATGTGACAATTAT TCACCCAAAAAAGAAACTCAATTTATGCTAAGTTTATGGTTGTTATGAAGAACGGTTTTATTAATAGTATATTTCAGATTCTTCATGGATTTTTAGTTAT CTATTATCATTGTCAGATTTTTAAATCTTTCAAAATTTGAATTTTAACTTGATATAGTTATGTTGAAGAACCGTTAAGTCAAGTTTTGAGTGAACATGTG TGCTTGTTGAAACCATGTAAATGCAAATCTGCTGAACTCCTTTATCACAATGATTTTATTGAGTAAATAATTTATTGCAACCTTCATTCAGATAATTCTT GAAATGATTATGCATCTGTGTTGTAGATGATGAAGCAAGATGAAAGTGCAC
• Tissue: flowers
• Gene name: LI_gene_41612;
• Additional information: details;

Expression of Ll_transcript_196099

FPKM

• FPAB: 15.2
• FPNAB: 11
• LF1: 4.9
• LF2: 6.6
• LF3: 3.7
• LF4: 6.3
• UF1: 4.7
• UF2: 5.8
• UF3: 6.7
• UF4: 7.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_196099

• Blastp: Serine/arginine-rich splicing factor RS2Z32 from Arabidopsis with 54.44% of identity
• Blastx: Serine/arginine-rich splicing factor RS2Z33 from Arabidopsis with 76.19% of identity
• Eggnog: serine arginine-rich splicing factor(ENOG4111N8Y)
• Kegg: Link to kegg annotations (AT3G53500)
• CantataDB: Link to cantataDB annotations (CNT0001557)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456367.1)
• Pfam: Zinc knuckle (PF13917.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;