| Id Trinity | FTRINITY_DN54321_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_196117 |
| Sequence | ATTATTAGGTTAAGCTGAGAAACGAAAAACAACTGCAATCATCGTCTTTAATCTCAGAGTTTGAAGAAATTGACAATGCCTCGCTACGAAGATAGATATG ACAATACTCGCCTCTATGTTGGTCGCTTGAACTCGAGGACACGCTCCCGCGATCTTGAGCGAGTCTTTAACAGATATGGAAGGTAATTTTAACAATCATA ATTGCTATATCATAAATATGTATAGGAGAGTGGAGTTTGTTATATTATGTCATGTTTGCTTGAGGTGTGCATGCCTTGTGGCTATTTCGTGAAAAGATCA TGTATGGGCTTCATGCTTATTAGGCGCAGCCAATCAAATGCTCATTAGTCACCGAAGTAACAATTTAACAAGATGACAAAGACCCGGGAACATTTATTTT AATGTTATCTCCATATTTTAGTTGGTTGTAGATAATAGGCATCTGCCTACTGTAAGAGTCACTCCTTTCTTTCTGAGAGGTGGCATGAGCTTTTGTTAGG AGTAACCTTTTAGTGTTTGTGTCGGGTAATTTGTGCCAATTTACATATGGGAAAATTTAATGGTAATGCTGCCTTTATTAATCAATTGATTCTGTTCTTT GTGAATTGGCAAGCTACTAAATTAGTGATTAGTTGGTATGGGGGTGTCGTCCATGTGCTATGCTGAAAGTCGAGGGATAATAAACAGGTTTTTCCCAAGC CTTTTCTGTGCTTGGATATATGTTGGCTATTCGTCGTGTTATGCATGGCAAGCATGTCCCCTAGGTGTCATGTTTTTTAACTTGAATGATCTTGTTGAAG GTTTCTGGGGTATTTTTCCTAAACTTGGAGGTCTTTGGTGGGAGGGTGGCCTTGGTGGAATAAATTCCTGCCGAGTGTAGACTTTGGCGATTCTTTCTGT AGTGTTATTGCGTATTTTTATGGAAATGGCAACAAATCACAAACTGGTGTTTAGTTCGTCTTTGATGGTCGAAGTATCATGCACTTGCAGTAGTTAAGTA ATGATGGCCTTACTGTTTCTGGAAATCATTTCCGCAGAGTTCGCAATGTGGATATGAAGCATGATTTCGCCTTTGTTGTAAGTTGTCAATCTTTCCCTGT TTATTTATTTATTTTTACTTTGTTCACCTCATTCCTTTGCTCAAATGTCGGTTTTAGTATCTTCTTGGGGAATCCAGTTATAGATGATGGTAAGATTTGT GTTACTTTCCTAGCATGTTCTTTACATCTTCTGTACAGGAATTTAGTGATCCTCGAGATGCTGATGATGCAAGATATCACTTGGATGGTCGTGATTTTGA TGGAAGTCGTCTTATTGTTGAGTTCGCAAAAGGGGTTCCTCGTGGTTCCCAGGCGCCTCGTGGTTCCCGGGAATATTTGGGGCGAGGTCCTGCTCCTGGA TCTGGGCGCTGCTTTAACTGTGGCCTTGACGGCCACTGGGCCCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTATCGCTGCGGGGAGAGAGGTC ACATAGAAAAGAACTGCAAGAATAGTCCCAAAAAGTTGAGACGTGAAAGGAGTTATTCACGCTCACCAGTCAGGGGACGTTCTCCTCGTCGTGGCAGAAG CAGGGAGCGAAGCTACAGCCGAGACCGCAGCTACAGCCGATCAAGATCCCCTGTCCGTGAGCGCAGTCCTGTTCGTAAAGATAGATCAGAGAGTCCTCGC TACAGAAGCCCTGAACCCAAAAGTAGCCCTCTGCCCTCCAATGCAAGGAAGCATAGTCCATCACCTGACCGAGGTAGCCCACAGAAGAGCGGTGATATTT CTCCTGGTAATGATAGGTTGGCCATACAGCAAGACGGGTCTGACTACAGCGATGGTCCTAGAGAGAAGAGTGGAAGCCCTGCTAGCCCTGCAAGGGACCA TGAAGATGACAGTCCTAGAGCTAATGGTGCTAGCCGTAGCCCTAGCCGCAGTCCCAGGGATGAGAGGAGCCCCATTGACAATGATGATGACAACCACCGC GGTTCCCCTAGAGGCAGTGAGTCACCTTAAGAAGTTTCTGATAAATGAACACAGGATGTGGGATTTATATGCTTTGTTTATTAAATGCACTTTATTTTGA ACTGTATGTGACAATTATTCACCCAAAAAAGAAACTCAATTTATGCTAAGTTTATGGTTGTTATGAAGAACGGTTTTATTAATAGTATATTTCAGATTCT TCATGGATTTTTAGTTATCTATTATCATTGTCAGATTTTTAAATCTTTCAAAATTTGAATTTTAACTTGATATAGTTATGTTGAAGAACCGTTAAGTCAA GTTTTGAGTGAACATGTGTGCTTGTTGAAACCATGTAAATGCAAATCTGCTGAACTCCTTTATCACAATGATTTTATTGAGTAAATAATTTATTGCAACC TTCATTCAGATAATTCTTGAAATGATTATGCATCTGTGTTGTAGATGATGAAGCAAGATGAAAGTGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41612; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196117
| Blastp | Serine/arginine-rich splicing factor RS2Z32 from Arabidopsis with 54.44% of identity |
|---|---|
| Blastx | Serine/arginine-rich splicing factor RS2Z33 from Arabidopsis with 76.19% of identity |
| Eggnog | serine arginine-rich splicing factor(ENOG4111N8Y) |
| Kegg | Link to kegg annotations (AT3G53500) |
| CantataDB | Link to cantataDB annotations (CNT0001557) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456367.1) |
| Pfam | Zinc knuckle (PF13917.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |