Id Trinity | FTRINITY_DN54341_c3_g1_i8 |
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Name Transcript | Ll_transcript_197575 |
Sequence | GCTGGATCCCCATGATGACCAAAAGGTCAAGGGTTTGATTCCTGGGAGCGACACTTGTTGGGAGAGGTAGTCACGCACTCCGAAAGGGATTAGTTCATAA GGAGCTCATTTTTTGGCATTTGTGTCTCTAATTGGTGACAGTATGCAATTTTTCCTATTCATAAGGAGCTTATCTTTTGTTAACATCTACTATCTTTTGT TAGGTAGAATTCCTGTTCGTTTATATGTGTGGACTGTTAGCGAGGACTTCGATGATTTAGAAGATGCACCTGAAATTGATAATTGGGACAAAGTCTCTTA TATCAACCGGCCTATTGAGATTCATAAGGACGACGGTAAATACTTCAGCTTAAATGACGCGGTTAGGAGTCTTCTTCCCGAGTTTTTTCCAGGAAGTTCC TTTGTTAATGAAGAAGATGCAAGCATCAACCAAAGTACTGGAGAAGAGGAAGAGAATACATTTGATCCCGTGTCATCTTTCCAACCACTTGAGAATGCCG AAATCAAGCTTGTACGCATTCAAGGGATAGAACCAAAGTTGGAGATACCTTTTTCTTGGGTGGTTAACAACTTAATGAATCCTGAGTATTTTCTGCATAT CTGTGTCTGCTTGAAACTTTCAGGAGCCAAAGCTTTGCAGTAGAAAGGGCGACCTAATGTACGAAGGTCCCACTGGGGATCTGGGGAGGGATATAAAATA ATTTATCGGTTGAGTGACATGCCTTGTGCGCGGTTGTTTGAGACTAGGCTGCATGTCCACTGGTTGCAGAGGTTCATCACTAGGAACAGGTACAGTCTTC ACCTGTAACATAGACATATCAGGTGTGCCAACCAACAATTCTAAACAACATCAATATAATTGGTTTGTATGTGTGTCTAAAAACCAAATATTAACTTACC AAATTCTTGAATATGAGATTATAGAACATCTGGATGTATCTTTGCTTGCCCTCTTTTTGATCCTTATTCACTTGCCTCCAGAAAGTGTAAATGCTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_41794; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197575
Blastp | Autophagy protein 5 from Arabidopsis with 55.8% of identity |
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Blastx | Autophagy protein 5 from Arabidopsis with 55.8% of identity |
Eggnog | autophagy protein(ENOG410XQ71) |
Kegg | Link to kegg annotations (AT5G17290) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456329.1) |
Pfam | Autophagy protein Apg5 (PF04106.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |