| Id Trinity | FTRINITY_DN54348_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_197487 |
| Sequence | CGCAACTGCATCGGGCCGCTCCAGACCGCATCGATGTCAAAAATATGTTTTTAGTCACAAAGTAATTCACACCGCAACGCCTGCAATCCGCATCACAATA GCTGCAATGGCCGCAATCGCAATAACTACAACTGTTACCACAATCGCGATCACAACCACAATTTAAAACACTGGTTACACATGTTGATATGTTAATATTT TAGAAGTCGATGAAACTGTATCATGAATGTAGCTGTGGCCGCATATGTCTGCAATTGTCGAAACCGTCAAGGTTTAGAAAGTTTTTAAAACAATCGCTAT TTAAAATGCTGTATAATCTTTAATTATTGGTGTTTCTCGAAGAATAATGATTATTCTTATAGAATATGGAGTTTTGCTTTAGGCTCCCTGATCCTAAGAA CTAGTTACTCTATCAAGGATATAAAACTCATGCTTTGTATTAGGCACCTTTCATTATGAGAAAAGCTTTTGAAAATTGTTTATTTTAATAAGCTAATGGA AACAAGTTATTTTTTACTTATTTCCAGAAAAATATATAGAATAAGTGCTTGACTAAATTGTTTACCCAAATGCCCCTTAGTGAATTCCAGCTTCACTTGC ATCTTTACTATCTCAATTTTCTCTGGTTCTTGCTGTGTTTCTGAACTATGCTTTATTTTTCTTAATGGAGACATTACTGTGACAAGCTTATCTATGCGTT AACACTAATGCATTCTGTATTTTGGCTAAGTTGTGAAAGCAAACAAATATGCAGTGTGAAATTCAGCTTATAGTTTGTAATATGATATGGTCTTTTGATC AATTGGTTTTTTGTATGAAGATGGATGGCGAAGTCGGTGGGTAGTATCGGATTGGAAAAGGACTGAAGGTAAAGCAGGATCATTCAAGCACACAGCTGGA AGATGGGCTGGAGATCCAGATGATAAAGGCATTCAGACATCTAGTGATGCCAAACACTTTGCCATCTCTGCGAAGATACCAGAATTCAGCAACAAGAACA GAACTCTGGTCTTCCAGTATTCTATTAAACTTGAGCAAGATATTGAGTGTGGTGGAGGTTACATGAAGCTCCTTTCTGGATTTGTCAATCAAAAGAAGTT TGGCGGGGATACTCCATATAGTTTAATGTTTGGACCAGATTTATGTGGCACAGACACAAAGAAGCTCCATCTCATTCTCTCCTACCAGGGTCAAAATTAC CCCATAAAAAAAGACCTTCAATGTGTAACTGACAAGCTAACTCATTTTTACACGTTCATTCTGAGACCGGATGCTTCTTACAGCGTGCTGGTTGATAATA GAGAAAGAGATTCGGGAAGCATGTATACAGATTGGGACATTCTTCCTCCAAGAAAAATCAAAGCTGTCAAGGCAAAAAAGCCTGCTGACTGGGATGACAG AGAATACATAGAAGATCCAAACGATGTCAAACCTGAGGGATATGATTCAATCCCTTCAGAAATTCCTGACCGAAATGCTAAAGAGCCTGATAATTGGGAT GAGGATGAAGATGGTTTGTGGAAATCACCGAAGATACCAAATCCAGCATACAAAGGACCATGGAAACGAAAGAAAATCAAGAATCCTAACTACAAAGGGA AATGGAAAACTCCATGGATTGACAATCCAGAGTTTGAAGACGACCCAGATCTTTATGTGCTTAAACCTATCAAGTATGTGGGCATTGAAGTTTGGCAGGT GAAAGGTGGTTCTGTTTTTGACAACATTTTGATTTCTGATGATCCTGATTATGCAAAACAAGTTGTTGAAGAAGTTTTTTCTAATAGGGAGATTGAAAAG GATGCTTTTGAGGAAGCAGAGAAAGTGAGAAAAGCTAAAGAAGAGGAGGAGGCTCAAAGAGCAAGAGAGGAAGGTGAAAAGCGGAGACAAGAGAGAGGAC ATGATCGGCGACACCGGGATAGATATAAGGACAGATATAGAAAGGTTAGTATTCTGGTTGAATAAGCTCAATTTTCTTTCCTTTCTTTTTCAATGAATCT TGACTCCCTTTATAGGATAAGAAAAAATTCAGTAGAATGAAATGAAACTCTAGTTCTAAAGTAATATTCTAGTCGTGTTCAAACTATGGCTTAAGCTTTG AAATAAACAATAAAACCAAGCAGTGTTTCCTCTATGGAAAAATGTATGTGGAAGTTAAACCAACTTAACTAACAATAATTTAGGAAGTACTTCTCTGAGT TAAGGCCTTAAGTTGTAGAGAAGTCTTTTTAAGTTCTACATATTGTGGCTCACCATTTTTAGAGCTCAATATTTCCTTGTGCCATTGAAACAAAAAACTT AATAGTTGGGATTGTTAGTACATAGTGAATTTAGTGGATAATGAACCTAACATTAGCTATGTACTACACTTGGATATCAATAAATGCATTTGTATGTTTC TCAGGATGATTATAGCAGTAAGCTATACTAAGACTCATTCCTCATAATAGAGATGTTTGAGGAACTATCATGGAATGCTAATATTCTGCATGATAAATAT CATAGCCACTTGAAACGTAGTTCTCTTTGGTACTGATGCGGGTACATAGTACGCGATACGTTACCCTGTCAAATGCTAGTGAGCTACGGGTATATTCAAT AGGTTTCTATAGCTCTTTACACCGTCATTTCTAGTGTTGCTGCTTGTAGGTTTGAATCAACTTTTGTTTCACCATAGAAGAAATACCCAAGGATAAAAAA AGTTCTTGTTTGTTATAATTCATTCATGTAAGTGAGTGTGCAATATCAATTCTTCTTCTACTCTTTTACTTAAACTATAGGTAAAAATCCGGTTTATTCC TCGAAGGGAACCAGTTTGTAAAAGAACCACGAATTGGTACAAGATAACCAATTCCTCATTCCAGAGAGAATTGTATTTCAATGATAAATACCATTTTTTT TTGCTGCCAAAAAAATCTGCACAATATTCATTGTTTCTTACACTAAGTTGTTCTCCCATGTGCAGCGTCGTCATGATTACATGGACGATTATCATGTAAG TAGCATTTTTTTATTGTAGTTCTGTCTAGTGATAATAATTAGATCATCTAAGTGCCATTTGTTTGCTATATGCCTATATTTATATAGGATGGGAATCATC TATAGTATTGAACTATTCAGTATGTGATATGAGGGGAAAGGGGTCATTGACTCATTGGTTATATTAGTTTATTCAAAAATTATTTAAATCTGGACTGTTA AAATAATTTCATACCATGTGTTGACATGTGCATCCATCATCTCAACTCATTTATCCAAAACATGATACTGGCTGCTTTTTATATGATAGTATTGATTGCA AATTAATTATGGTAGGAAGAGGCTGTCTTTGTTATTGCAGTTTGCAGCACATGGTTATGGAATGAGTGTGATTGATGTGCAATATTACTATATTTGACAA ATTGTTGTCTATTATACTTAAATGACTTCCTTTAATGTGCAGGATGAGCTATAATGGGGCAAAACGTTCGTATTTCTTATCTGGTTCACAATAATTTCGA ATAAATTATGATTATGATAAGTGGATTTTGTACCAAGTGTTAATTTCTGGTGGACTTTGTGTATTTTTCTTCAGTTTCCTTCTATTTGTCATGCATTTAA CTTGGCCCCAAATTCCCATTGAAGCTTGCTGTAATATCATGATGTAGGATTGTTCTTGACTCACATTTGTACCATAATTTCTACGTTCTACTTTTAGCTG TTTGAATAAGAAAATGAAAATGATATTCTTAAAAATATTGAAAAAAACTTATCATTTGAAAATGAAAATAAAAAAATTAAATCTATCATGTTGATAAATA GCCTTTTCTGAACTACATTGATGATTATGGGTCTTCCACTTTTACAAAGTTTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41848; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197487
| Blastp | Calreticulin-3 from Arabidopsis with 77.63% of identity |
|---|---|
| Blastx | Calreticulin-3 from Arabidopsis with 80.78% of identity |
| Eggnog | Calreticulin(ENOG410XRR7) |
| Kegg | Link to kegg annotations (AT1G08450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449847.1) |
| Pfam | Calreticulin family (PF00262.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |