Ll_transcript_195561

• Id Trinity: FTRINITY_DN54349_c0_g1_i1
• Name Transcript: Ll_transcript_195561
• Sequence: GTTATTAGTTTTTTTGACCCTTTCTAATCGTCTTTTCTTATTGTAAATCCGATATTTTCTAGAGTTTATCATGTTTGATTTTAATAGAGCTAAAAAGAAC TGCTATATCTTTAATGCAGTAAATCAGACTTGGATCAAGCTGAGTTTTCTAAATTCCATTCTAATGTGAAGCGGGGTGATATTGTTGGTATCACTGGATT TCCAGGAAAAAGTAAGAAGGGAGAGCTCAGTATTTTTCCAAAGACTTTTGTATTGCTGTCTCATTGTCTGCATATGATGCCAAGACAAAAATCTGCTGCT GCTGCTGATAATGCAAATTTGTTGAAAAATCCGTGGGTTCCAGGAAGTACCAGGAATCCGGAAACATACATTTTGAAGGATCAGGAAACAAGATACCGGT TACGCCATTTGGATTTGATGCTTAATCCAGAGGTTCGAGAAATATTCAAGACTAGGTCTAAAGTCATTTCTTACATTAGGAGATTTCTTGATGACCTTGA TTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCCGGTGGAGCAGCAGCTCGCCCATTTGTAACTCATCACAATGATCTTAACATGAGGTTATTC ATGCGAATTGCCCCTGAACTCTATCTCAAGGAGCTTGTTGTTGGTGGGATAGATCGTGTTTATGAAATTGGCAAACAATTTAGAAACGAGGGTATAGATT TGACTCACAATCCTGAGTTCACTACCTGTGAGTTCTATATGGCTTATAAGGATTACAACGATTTGATGGAGATAACAGAGCAAATGTTGAGTGGCATGGT TAAGGAACTTACTAAAGGCAGCTACAAAATCAAGTATCATGCAGATGGGATTGATAAGGATCCTATTGAAATTGACTTCACTCCACCTTTCAGGAGGATT GACATGATTGATGAACTGGAGAAGATAGCAGGCCTCAGTATTCCGAAAGACTTGTCGAGTGACGAAGCTAATCAATATCTGAAGGATGCATGCTTGAAGT ATGAGATCAAGTGCCCTCCTCCTGAAACAACTACACGTTTGTTGGATAAACTTGTGGGACACTTTTTGGAGGAAACCTGTGTAAATCCTACATTCATCAT AAACCATCCTGAGATAATGAGTCCTTTGGCAAAATGGCATAGATCAAAACCAGGCCTGACAGAGCGTTTTGAATTGTTTGTTAACAAACATGAACTTTGC AATGCATATACTGAATTGAATGATCCTGTAGTACAACGACAGAGATTTGCTGATCAACTCAAGGATCGGCAATCAGGTGATGATGAAGCAATGGCATTAG ATGAGACATTTTGCACGGCCCTGGAGTATGGTTTGCCACCAACTGGTGGTTGGGGTTTGGGCATTGATCGGTTGACCATGTTGCTGACTGATTCACAGAA TATTAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCCCCAAGATTGAACATGGTGTTGTCATTTGGTCCATTAAAAGCATCCTTCATAGGTATATTATACT TTTAGTCATAAACCATGCACACTTACTGATTATGTGTTTCCTTTCAATGTAGCCCAGTGCATACCTTTCTTTTTCAATGAATAGAAGAGCCTAGAAAAGT TATGTTTTTTATTCTCTGATTCACACACCTGGGAAGAGCTTGTGAGTCGGTCCATTAAACTTTACTTGTATTAGTGCTTCATGTTGCCATTAATTTGTTT GTGATAGTTCTATTTTTCTTTGGGACAAGCTCCTCTAAAGTCTAAAGTGAGTTTTTTTAAGGTGAGAAAGTGAGGGTGTATCCACACTTGACTCAACCCA CTAAAGGATTCAATGATAACCATAGATACATCCTCACTTTCTCACTTTCTCACTTTAGAGAGATGCTCACATTTGAGGTCTTTTCTCCTTTTTCAGACAT GCTGTGCATGTTAGTTTGTGTTATAATCC
• Tissue: flowers
• Gene name: LI_gene_41860;
• Additional information: details;

Expression of Ll_transcript_195561

FPKM

• FPAB: 0.3
• FPNAB: 0
• LF1: 0
• LF2: 0.1
• LF3: 0.6
• LF4: 0.3
• UF1: 0
• UF2: 0.7
• UF3: 0.2
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_195561

• Blastp: Lysine--tRNA ligase from Oryza sativa with 85.64% of identity
• Blastx: Lysine--tRNA ligase from Oryza sativa with 83.86% of identity
• Eggnog: lysyl-trna synthetase(COG1190)
• Kegg: Link to kegg annotations (4333345)
• CantataDB: Link to cantataDB annotations (CNT0001053)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439359.1)
• Pfam: tRNA synthetases class II (D, K and N) (PF00152.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;