Id Trinity | FTRINITY_DN54349_c0_g1_i10 |
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Name Transcript | Ll_transcript_195573 |
Sequence | ATGAGATCTATTGATTGTCATATTGACTCTCTTTCTTCTTTCTTCACATCAACTGCTTATTATTGTTATCTGGATACCACTAAATAGGCATGGTTAAGGA ACTTACTAAAGGCAGCTACAAAATCAAGTATCATGCAGATGGGATTGATAAGGATCCTATTGAAATTGACTTCACTCCACCTTTCAGGAGGATTGACATG ATTGATGAACTGGAGAAGATAGCAGGCCTCAGTATTCCGAAAGACTTGTCGAGTGATGAAGCTAATCAGTATCTGAAGGATGCATGCTTGAAGTATGAGA TCAAATGCCCTCCTCCTGAAACAACCACACGTTTGTTGGATAAACTTGTGGGGCACTTTTTGGAGGAAACTTGTGTAAATCCTACATTCATCATTAATCA TCCTGAGATAATGAGTCCTTTGGCAAAATGGCACAGATCAAAACCAGGCTTGACTGAACGTTTTGAATTGTTTGTTAATAAACATGAACTTTGCAATGCG TATACCGAATTGAACGACCCTGTTGTACAAAGACAGAGGTTCGCTGACCAACTCAAGGATCGGCAATCAGGTGATGATGAAGCAATGGCCTTAGATGAAA CATTTTGTACGGCCCTGGAGTATGGTTTGCCGCCAACCGGTGGCTGGGGTTTGGGCATTGATCGGTTGACCATGTTGCTGACTGATTCACAGAATATTAA GGAGGTTCTTCTTTTCCCTGCCATGAAGCCTCAAGAATGAATCTTCAATCAACACTTTGAGTTCTCATTTCATCCCATTGAATAGGAACAGGAGCTGGTT TATTTATGTGACTAATAAACGTGGCATCTACATTCAGCGTATTGATCTATCCTTGTAAGGGTAGTTTGGTGATTGGGTTTAGTTTTATTAATATTCCAGC TTTTTATTATATATTGGAGATAATAGTTGTATCAATTCAATTCCTTGAAATATTTCATTAACATTTGTTTTTTTAAAGAGTTTAATGTCAAGAGTATAGT TTTTTAAAAAAAAAAAAACâBLAST |
Tissue | flowers |
Gene name | LI_gene_41860; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_195573
Blastp | Lysine--tRNA ligase from Oryza sativa with 89.35% of identity |
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Blastx | Lysine--tRNA ligase from Oryza sativa with 89.4% of identity |
Eggnog | lysyl-trna synthetase(COG1190) |
Kegg | Link to kegg annotations (4333345) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439359.1) |
Pfam | tRNA synthetases class II (D, K and N) (PF00152.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |