Ll_transcript_195575

• Id Trinity: FTRINITY_DN54349_c0_g1_i12
• Name Transcript: Ll_transcript_195575
• Sequence: CTGTCATATCACTCACATTCGCTTCTCTCGCTCATATTCTTCCGCCGGCGACTTCACTTTCTCTTACGATGGCAACTCCACCAGACCCGTTGGCTACATC CACCACCGCCACCGCCGCCGATGCCGGAGAAACCCTAAGCAAAAATGCATTGAAGCGAGAACTCAAGAACAAGCAGAGAGAAGAGGAAAGGAAGCGCAAG GAAGAGGAGAAGGCCAAAAAGGCTGCTGAAGTGCAACAGGCTAAAGATAACAACAAATCTGCAACTGCTGCTGATGAGGAAGATATGGACCCAACACAAT ACCATGAGAACAGGCTTAAGAGTCTTGCAGCTCAGAAAGCAGAAGGGAATAACCCGTATCCACACAAGTTCTTCGTCTCTCTGTCTATTGAGGAATACAT CAAGAAATATGGAGGGTTAAATAATGGGGAGCACCTTGAGGATGTATCTGTCTCCTTGTCTGGCCGAATCATGCACAAACGTGCTTCTGGTGCAAAGCTT GTCTTTTATGACTTGCATGGTGGTGGTTTCAAGGTCCAGGTGATGGCTGATGCAAGTAAATCAGACTTGGATCAAGCTGAGTTTTCTAAATTCCATTCTA ATGTGAAGCGGGGTGATATTGTTGGTATCACTGGATTTCCAGGAAAAAGTAAGAAGGGAGAGCTCAGTATTTTTCCAAAGACTTTTGTATTGCTGTCTCA TTGTCTGCATATGATGCCAAGACAAAAATCTGCTGCTGCTGCTGATAATGCAAATTTGTTGAAAAATCCGTGGGTTCCAGGAAGTACCAGGAATCCGGAA ACATACATTTTGAAGGATCAGGAAACAAGATACCGGTTACGCCATTTGGATTTGATGCTTAATCCAGAGGTTCGAGAAATATTCAAGACTAGGTCTAAAG TCATTTCTTACATTAGGAGATTTCTTGATGACCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCCGGTGGAGCAGCAGCTCGCCCATT TGTAACTCATCACAATGATCTTAACATGAGGTTATTCATGCGAATTGCCCCTGAACTCTATCTCAAGGAGCTTGTTGTTGGTGGGATAGATCGTGTTTAT GAAATTGGCAAACAATTTAGAAACGAGGGTATAGATTTGACTCACAATCCTGAGTTCACTACCTGTGAGTTCTATATGGCTTATAAGGATTACAACGATT TGATGGAGATAACAGAGCAAATGTTGAGTGGCATGGTTAAGGAACTTACTAAAGGCAGCTACAAAATCAAGTATCATGCAGATGGGATTGATAAGGATCC TATTGAAATTGACTTCACTCCACCTTTCAGGAGGATTGACATGATTGATGAACTGGAGAAGATAGCAGGCCTCAGTATTCCGAAAGACTTGTCGAGTGAC GAAGCTAATCAATATCTGAAGGATGCATGCTTGAAGTATGAGATCAAGTGCCCTCCTCCTGAAACAACTACACGTTTGTTGGATAAACTTGTGGGACACT TTTTGGAGGAAACCTGTGTAAATCCTACATTCATCATAAACCATCCTGAGATAATGAGTCCTTTGGCAAAATGGCATAGATCAAAACCAGGCCTGACAGA GCGTTTTGAATTGTTTGTTAACAAACATGAACTTTGCAATGCATATACTGAATTGAATGATCCTGTAGTACAACGACAGAGATTTGCTGATCAACTCAAG GATCGGCAATCAGGTGATGATGAAGCAATGGCATTAGATGAGACATTTTGCACGGCCCTGGAGTATGGTTTGCCACCAACTGGTGGTTGGGGTTTGGGCA TTGATCGGTTGACCATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCCCCAAGATTGAACATGGTGTTGTCATTT GGTCCATTAAAAGCATCCTTCATAGGAACAGGAAAAAATCATGATGGATCTCAGTTTTGATTTTTTTTATTTGGTATGTACTGCTCAAGCAGCATCTACA CTTTTTGTTTTAAGGGCAGATGGAAGAGTTTGTATACTCTATTTTATTTGATTCTTTTGGTGATCCCGTTGAGTTTTATGTCATATACCAATTTATTTAT TATATATTAGTGATAATAGTTATATATACATTGAGAAAAAGATATATTCACTGACAACGTAATTGCGTAAAAA
• Tissue: flowers
• Gene name: LI_gene_41860;
• Additional information: details;

Expression of Ll_transcript_195575

FPKM

• FPAB: 14
• FPNAB: 24.3
• LF1: 23.4
• LF2: 14.7
• LF3: 15.7
• LF4: 24.7
• UF1: 19.8
• UF2: 16.4
• UF3: 20.8
• UF4: 19.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_195575

• Blastp: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 76.26% of identity
• Blastx: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 78.12% of identity
• Eggnog: lysyl-trna synthetase(COG1190)
• Kegg: Link to kegg annotations (AT3G11710)
• CantataDB: Link to cantataDB annotations (CNT0001053)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439359.1)
• Pfam: OB-fold nucleic acid binding domain (PF01336.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;