| Id Trinity | FTRINITY_DN54349_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_195568 |
| Sequence | CTGTCATATCACTCACATTCGCTTCTCTCGCTCATATTCTTCCGCCGGCGACTTCACTTTCTCTTACGATGGCAACTCCACCAGACCCGTTGGCTACATC CACCACCGCCACCGCCGCCGATGCCGGAGAAACCCTAAGCAAAAATGCATTGAAGCGAGAACTCAAGAACAAGCAGAGAGAAGAGGAAAGGAAGCGCAAG GAAGAGGAGAAGGCCAAAAAGGCTGCTGAAGTGCAACAGGCTAAAGATAACAACAAATCTGCAACTGCTGCTGATGAGGAAGATATGGACCCAACACAAT ACCATGAGAACAGGCTTAAGAGTCTTGCAGCTCAGAAAGCAGAAGGGAATAACCCGTATCCACACAAGTTCTTCGTCTCTCTGTCTATTGAGGAATACAT CAAGAAATATGGAGGGTTAAATAATGGGGAGCACCTTGAGGATGTATCTGTCTCCTTGTCTGGCCGAATCATGCACAAACGTGCTTCTGGTGCAAAGCTT GTCTTTTATGACTTGCATGGTGGTGGTTTCAAGGTCCAGGTGATGGCTGATGCAAGTAAATCAGACTTGGATCAAGCTGAGTTTTCTAAATTCCATTCTA ATGTGAAGCGGGGTGATATTGTTGGTATCACTGGATTTCCAGGAAAAAGTAAGAAGGGAGAGCTCAGTATTTTTCCAAAGACTTTTGTATTGCTGTCTCA TTGTCTGCATATGATGCCAAGACAAAAATCTGCTGCTGCTGCTGATAATGCAAATTTGTTGAAAAATCCGTGGGTTCCAGGAAGTACCAGGAATCCGGAA ACATACATTTTGAAGGATCAGGAAACAAGATACCGGTTACGCCATTTGGATTTGATGCTTAATCCAGAGGTTCGAGAAATATTCAAGACTAGGTCTAAAG TCATTTCTTACATTAGGAGATTTCTTGATGACCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCCGGTGGAGCAGCAGCTCGCCCATT TGTAACTCATCACAATGATCTTAACATGAGGTTATTCATGCGAATTGCCCCTGAACTCTATCTCAAGGAGCTTGTTGTTGGTGGGATAGATCGTGTTTAT GAAATTGGCAAACAATTTAGAAACGAGGGTATAGATTTGACTCACAATCCTGAGTTCACTACCTGTGAGTTCTATATGGCTTATAAGGATTACAACGATT TGATGGAGATAACAGAGCAAATGTTGAGTGGCATGGTTAAGGAACTTACTAAAGGCAGCTACAAAATCAAGTATCATGCAGATGGGATTGATAAGGATCC TATTGAAATTGACTTCACTCCACCTTTCAGGAGGATTGACATGATTGATGAACTGGAGAAGATAGCAGGCCTCAGTATTCCGAAAGACTTGTCGAGTGAC GAAGCTAATCAATATCTGAAGGATGCATGCTTGAAGTATGAGATCAAGTGCCCTCCTCCTGAAACAACTACACGTTTGTTGGATAAACTTGTGGGACACT TTTTGGAGGAAACCTGTGTAAATCCTACATTCATCATAAACCATCCTGAGATAATGAGTCCTTTGGCAAAATGGCATAGATCAAAACCAGGCCTGACAGA GCGTTTTGAATTGTTTGTTAACAAACATGAACTTTGCAATGCATATACTGAATTGAATGATCCTGTAGTACAACGACAGAGATTTGCTGATCAACTCAAG GATCGGCAATCAGGTGATGATGAAGCAATGGCATTAGATGAGACATTTTGCACGGCCCTGGAGTATGGTTTGCCACCAACTGGTGGTTGGGGTTTGGGCA TTGATCGGTTGACCATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCCCCAAGATTGAACATGCCCAGTGCATAC CTTTCTTTTTCAATGAATAGAAGAGCCTAGAAAAGTTATGTTTTTTATTCTCTGATTCACACACCTGGGAAGAGCTTGAACAGGAAAAAATCATGATGGA TCTCAGTTTTGATTTTTTTTATTTGGTATGTACTGCTCAAGCAGCATCTACACTTTTTGTTTTAAGGGCAGATGGAAGAGTTTGTATACTCTATTTTATT TGATTCTTTTGGTGATCCCGTTGAGTTTTATGTCATATACCAATTTATTTATTATATATTAGTGATAATAGTTATATATACATTGAGAAAAAGATATATT CACTGACAACGTAATTGCGTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41860; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_195568
| Blastp | Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 76.26% of identity |
|---|---|
| Blastx | Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 78.12% of identity |
| Eggnog | lysyl-trna synthetase(COG1190) |
| Kegg | Link to kegg annotations (AT3G11710) |
| CantataDB | Link to cantataDB annotations (CNT0001053) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439359.1) |
| Pfam | OB-fold nucleic acid binding domain (PF01336.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |