Ll_transcript_196449

• Id Trinity: FTRINITY_DN54350_c0_g1_i1
• Name Transcript: Ll_transcript_196449
• Sequence: CAAATCATAGTCGATAAAATTTTATACTACTAGACCAACTTCTCGATATTAATAAAATCGAATCCATTCATAAAAAAGCTAAAAGGTGTGCAACTCCTCC TATGTTGGGTTCTTTCTCTCTTCAAATCCCTAATAAATTCAGTCCAAATTCAAATTCACTGAAATTTCCATCTAAATGGAGGATTCCGATGGAGTCCTCA ACTTCGATTTCGAGGGCACTCTCGACGCCGCTCCTCTCCCCTCCATCACCGCCACCGTCTCCGCCCCTTCCGGTCCTCTCATCCACCACGACGCCTCCTC TGTCGCTTCCTCCATTCCCAACGCCAACTCCCTCGCCATAACCCCTCACTCTGCCTCCGACCACGCCTCCGCCAATGTCCAAGGCCGGCGGAGCTTCCGG CAGACGGTGTGCCGGCATTGGCTTCGAAGCCTGTGCATGAAGGGAGACGCGTGCGGGTTCCTTCACCAGTATGATAAGGCGAGGATGCCGGTGTGCCGGT TTTTTCGGCTTTATGGAGAGTGCCGGGAGCAGGATTGTGTTTATAAACACACCAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCC CAATGGGCCTGATTGCCGATATAGACACGCAAAATTTCCTGGACCTCCACCTCCTGTTGAAGAGATCCTTCAAAAGATCCAGCATTTGTATTCTTATAAT TATAATGGCCCCAACAAAACTTTCCAACAAAGGGGTGCTAGCTATAATCAACAAGTTGAAAGATCTCAGTTTCCTCAAGGAGTTAATTCTACAAACCAAG GCGTGGCTGCAAAGCCATTGGTAGCAGAGCCAGGTAATGCCCAGCAGCAGCAACAAGTTCAACAGTCTCAGCAGCAGGTCAACCAGAGCCAAATGCAAAG TCCTGCTAATGGCCAGCCCAATCAAGCCAATAGAACTGCAATCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAAT CTTGAGTTATCTGTGCAACAAGGAGTATGGGCAACTCAAAGGAGCAACGAATCCAAACTAAATGAAGCCTTTGACTCTGTGGAAAATGTGATATTGATTT TCTCAGTCAATCGAACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTTCTGGGGGAAACTGGAAATACGCTCATGGAAC TGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCGTTCCACAAAACACGCCATTTGCGGAATCCATACAATGAGAACTTA CCAGTGAAGATAAGTAGAGATTGTCAAGAGCTGGAGCCCTCTATTGGTGAGCAATTAGCATCCTTGCTTTATCTGGAGCCAGACAGTGAACTCATGGCTA TGTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAAAGAGCAAAGGGAGTAAATCCAGATAATGGAGGAGAAAATCCAGATATTGTACCATTTGAAGACAA TGAAGAAGAGGAAGAGGAAGAGAGTGATGAAGAGGAGGAGAGCTTTGGTCATGGTGTTGGACCACCTATTCAAGGCAGAGGAAGGGGCAGAGGCATGATG TGGCCGCCTCACATGCCTCTAGGCCGTGGAGTCAGACCTATGCCTGGGATGCCAGGTTTTAACCCAGGAATGATGGGTGATGGATTACCCTATGGACCTG ATGGATTTGGTATGCCGGATCTCTTTGGTATGGGGCCCCGTGCTTTTGCTCCATTTGGTCCTAGGTTCTCTGGTGATTTTGGAGGGCCTCCAGCGGCCAT GATGTTTCGTGGGCGACCCACACAACCTGGCATGTTTCCTGGTGGTGGGTTTGGGATGATGATGAATCCTGGACGCCCTCCCTTTATGGGAGGAATGGGG ATTGGTGGTGGAAATCCGCCAAGAGGTGGTAGGCCAGTCAACATGCCTCCAATGTTTCCCCCACCTCCGCCCCCACCTCAAAATGCCAACCGAGTCCCCA AAAGAGATCAAAGAACTAATGATCGGAACGACAGGCATGGCTCAGGATCAGAGCAGGGCAGGAGTCAGGACATGCAGAGTCAAAGTGGTGGACCTGATGA TGACATGCAATACCAGCAAGGATACAAGGCAAATCAGAATGATCAGAATGAAGATAGTGAAAGTGAGGATGAAGCACCAAGACGGTCGAGACACGGAGAG GGAAAAAAGAAAAGGGACGCATAGCAGATGCCAACACAAGCTCTGATCAATAGCATATTGATGATCCACTGACCAGGATTCTAGTTTCCAATGCTTTTAT TTTCAATGAAATGATGAAAGTTGAAGTTATAGCCATCAACCTAGAGTAAGCAATGATAAAGATGAGATAAGTTGATGTGATAATTAGTGTAGGGAGAAGT TCCAAAACAAATTAACTTTATAATTAGTGTTCTTTCACCCTATAGGTGAGAGCAAGAGACTTCCAGCTATATATATATACATATTTTTATTTACATAAGA ATTGACGAATTGAACCTACAAATACACCTTGATGATGCATGTAGCTTTGTGGTTTTATGAACTAATAATATGCAAGATCGTCTAAATCACTTGAG
• Tissue: flowers
• Gene name: LI_gene_41865;
• Additional information: details;

Expression of Ll_transcript_196449

FPKM

• FPAB: 5.9
• FPNAB: 6.3
• LF1: 7
• LF2: 7.2
• LF3: 6.5
• LF4: 6.8
• UF1: 4.7
• UF2: 6.4
• UF3: 6.6
• UF4: 7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_196449

• Blastp: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 63.99% of identity
• Blastx: 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 70.81% of identity
• Eggnog: zinc finger(COG5084)
• Kegg: Link to kegg annotations (AT1G30460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440105.1)
• Pfam: YT521-B-like domain (PF04146.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;