Id Trinity | FTRINITY_DN54350_c0_g1_i5 |
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Name Transcript | Ll_transcript_196455 |
Sequence | CAAATCATAGTCGATAAAATTTTATACTACTAGACCAACTTCTCGATATTAATAAAATCGAATCCATTCATAAAAAAGCTAAAAGGTGTGCAACTCCTCC TATGTTGGGTTCTTTCTCTCTTCAAATCCCTAATAAATTCAGTCCAAATTCAAATTCACTGAAATTTCCATCTAAATGGAGGATTCCGATGGAGTCCTCA ACTTCGATTTCGAGGGCACTCTCGACGCCGCTCCTCTCCCCTCCATCACCGCCACCGTCTCCGCCCCTTCCGGTCCTCTCATCCACCACGACGCCTCCTC TGTCGCTTCCTCCATTCCCAACGCCAACTCCCTCGCCATAACCCCTCACTCTGCCTCCGACCACGCCTCCGCCAATGTCCAAGGCCGGCGGAGCTTCCGG CAGACGGTGTGCCGGCATTGGCTTCGAAGCCTGTGCATGAAGGGAGACGCGTGCGGGTTCCTTCACCAGTATGATAAGGCGAGGATGCCGGTGTGCCGGT TTTTTCGGCTTTATGGAGAGTGCCGGGAGCAGGATTGTGTTTATAAACACACCAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCC CAATGGGCCTGATTGCCGATATAGACATGCAAAATCTGCTGGACCTCCACCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAACATTTGTATTCTTACAAT TATAATGGTTCTAACAAATTTTTCCAACAAAGGGGTGCTAGCTATAACCAACAAGTTGAACGATCTCAGTTTCCTCAAGGAGTTAATTCTACAAATCAAG GTGTGACTGCAAAACCCTTAGCAGCAGAGTCAGGTAATGCCCAGCAGCCGCAGCAAGTTCAACAATCGCAGCAGCAGGTCAGTCAGAGCCAAATACAAAG TCCCGCTAATGGTCAGCCCAATCAAGCCAATAGAACAGCAATCCCTTTACCACAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAACCGTGAAAAT CTTGAGTTATCTGTGCAACAAGGAGTATGGGCAACACAAAGGAGCAATGAATCCAAGCTAAATGAAGCCTTTGACTCTGTGGAAAATGTGATATTGATTT TTTCAGTCAATCGAACACGTCATTTCCAGGGGTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCAGGAGGAAATTGGAAATATGCTCATGGAAC TGCACATTATGGGCGGAATTTTTCTGTTAAATGGTTAAAGTTGTGTGAACTGTCATTCCACAAAACTCGCCACTTACGGAATCCATACAATGAGAACCTA CCAGTGAAGATAAGTAGAGATTGTCAAGAGTTGGATCCCTCAATTGGTGAGCAATTAGCATCCTTGCTTTATATTGAGCCAGATAGTGAACTCATGGCTA TCTCAATTGCAGCAGAGACTAAACGAGAAGAAGAAAAGGCAAAGGGAGTGAATCCCGATAACGCAGGAGAAAATCCAGATATTGTCCCATTTGAGGACAA TGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAAAGCTTCATTCAGGGTGCTGGGCCACCTAATCAAGGCAGAGGAAGGGGCAGAGGCATGATG TGGCCGCCTCACATGCCTCTTGGGCGTGGAGCAAGACCTATGCCTGGAATGCCGGGATTTAACCCAGGAATGATGGGTGATGGATTACCCTATGGGCCTG ATGGATTTGGTATGCCAGATCTTTTTGGCATGGGGCCCCGCGCTTTTGCCCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGCCCCCCAGCAGCGAT GATGTTTCGTGGGCGACCCTCACAACCTGGGATGTTTCCTGGTGGTGGGTTCGGGATGATGATGAATCCAGGACGCCCTCCCTTTATGGGAGGGATGGGG GTGGGTGGTGGAAATCCGTCAAGAGGTGGTAGGCCAGTCAACATGCCTCCAATGTTTCCCCCACCTCCGCCCCCACCTCAGAATGCCAACCGAGTCCCCA AGAGAGATCAAAGAACCAACGATCGTATCGATAGGCAGGGCTCAGGATCAGAGCAGGGCAGGAGCCAAGACATGCAGAGTCAAAATGGCGGACCGGATGA TGACATGCAATACCAGCAAGGATACAAGGCAAATCAGAATGATCAGAATGAAGATAGTGAAAGCGAGGATGAAGCACCGAGGCGGTCACGACATGGAGAG GGGAAAAAGAAAAGGGACACATAGAAGAATGGCAATACAAACTCTAAATGCCCTTCACCAAGCACAGCATATTGATGATCCACTAACCAGGATTCTAGTT TCCAATGAATTTATTTTCAATGAATTGATGAGACCAGATCTCTTTGTATGAGTTGTTTTTTGCCTAAGAGACCTGGGGTGCTTCACAATAAGTTTATTAA TTTATTTCACATGTCATGTCATTTTTACATATGGTTCATTGGACGGTTTAATGTTAAATTTAACACAATCTGAGGCCAAATTTAGTAGACTCAGAAGAAT GTATACCTATTTATTTAAAAGTTTATATTTTTAATACATAGATGGTGAATTAAACAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_41865; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196455
Blastp | 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 64.68% of identity |
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Blastx | 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 70.81% of identity |
Eggnog | zinc finger(COG5084) |
Kegg | Link to kegg annotations (AT1G30460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440105.1) |
Pfam | YT521-B-like domain (PF04146.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |