| Id Trinity | FTRINITY_DN54350_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_196457 |
| Sequence | GGCAAAGTTACAAAAACACTGGTTACTATGTTGTAATTAGATCGTCTAAACCTCATTTTAATCTTAGGGAATTGCCTTTTCTTTGTTTCTACATATTATT GACTTGTTGCATCTTGAAGTTCCCTTTTGATAGATAAAAAGGTCAAAAAAGAATTAAGGAAGTATGAAGTATGATGGTGATTCATGTATAGATGATAGAA ATTATTCAATAACCTTAGAGATCTAGGTTTATGAGAAAGAGCGAGTTCCACAGTTTGGGGTACATGTGACATGTAAGCTAAGTGATGGAGGGAACTTCTG ACATAATCATCACACCCCAATCTTAAAGACTGGGGTCGGTGCAAATTTGGCTAAGATTCGTTGGTGAGTTATGTTATGTCATTATTTAATTATAGGTAAG TTGTTGCCTTTGTCTATAATTCATGAATTAAAAGTTTGTTTGCACCTCCCATTTTGGGTGAATGATTTTTTATTAGTTTCAACTGATCAATAGTATTTGA AAATGGTGATTGTGAAAGAGATCAAATGTTCAGGATATTTATTCCTTTTCTTGTCCAAACATATTTATTCTAGTTTGACTTTGTTTCGTACTTTCGTACT TTTGTAATGCATTGTATTCTAGCTGCTTAACATTTGTAAATGATATCTTTGGCATATTTTCCAAGCAGTGGGTTTTCCCAACACAATAGGAGGTGCTTCA TGTCTTATTTCAGGGGTTTTGGCAGAAGAAAGGATGGTTAGATTCTGTGGAATTGTTCACAATGTTTTTTATAGTCTTGTCTTTGGTGCATTTTGCTCAA GGGGGATGAGTTTTTCAAAGAAGTTTCTGCCTTGCATTAGTTCTTGGTGTCACTATGGTGTTTGAGGAATGAAGTTTTATGTTCAGCTTCTCTGAAGGAT ATTCAAAGGAATTGATTTGGAAGGATTTATTTGTTTGATGTGGCTAGGATAGTATCCTGTCTTCTTTTTCTCTTTTTAGCTTGGTCTATGAGGATGTGCT ATTATACTTTGTATTCATTTAATTATTTTTTCTCAACTCTTATGTTAACAGTTGCCCTCTATCATCAAAGTAATATGTATGCATTCTTTGTCTGATTAGT TCTATTTATCTGCCATTATCTTCTTTGTTTAAGTTAAGGTTATCAACTTCTGTATATATGATTTTAATATTTTAATATTTCTGCATGTGTAGGTACAAGT TAGGATTTTGTCCCAATGGGCCTGATTGCCGATATAGACACGCAAAATTTCCTGGACCTCCACCTCCTGTTGAAGAGATCCTTCAAAAGATCCAGCATTT GTATTCTTATAATTATAATGGCCCCAACAAAACTTTCCAACAAAGGGGTGCTAGCTATAATCAACAAGTTGAAAGATCTCAGTTTCCTCAAGGAGTTAAT TCTACAAACCAAGGCGTGGCTGCAAAGCCATTGGTAGCAGAGCCAGGTAATGCCCAGCAGCAGCAACAAGTTCAACAGTCTCAGCAGCAGGTCAACCAGA GCCAAATGCAAAGTCCTGCTAATGGCCAGCCCAATCAAGCCAATAGAACTGCAATCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTG CAACCGTGAAAATCTTGAGTTATCTGTGCAACAAGGAGTATGGGCAACTCAAAGGAGCAACGAATCCAAACTAAATGAAGCCTTTGACTCTGTGGAAAAT GTGATATTGATTTTCTCAGTCAATCGAACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTTCTGGGGGAAACTGGAAAT ACGCTCATGGAACTGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCGTTCCACAAAACACGCCATTTGCGGAATCCATA CAATGAGAACTTACCAGTGAAGATAAGTAGAGATTGTCAAGAGCTGGAGCCCTCTATTGGTGAGCAATTAGCATCCTTGCTTTATCTGGAGCCAGACAGT GAACTCATGGCTATGTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAAAGAGCAAAGGGAGTAAATCCAGATAATGGAGGAGAAAATCCAGATATTGTAC CATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAGAGTGATGAAGAGGAGGAGAGCTTTGGTCATGGTGTTGGACCACCTATTCAAGGCAGAGGAAGGGG CAGAGGCATGATGTGGCCGCCTCACATGCCTCTAGGCCGTGGAGTCAGACCTATGCCTGGGATGCCAGGTTTTAACCCAGGAATGATGGGTGATGGATTA CCCTATGGACCTGATGGATTTGGTATGCCGGATCTCTTTGGTATGGGGCCCCGTGCTTTTGCTCCATTTGGTCCTAGGTTCTCTGGTGATTTTGGAGGGC CTCCAGCGGCCATGATGTTTCGTGGGCGACCCACACAACCTGGCATGTTTCCTGGTGGTGGGTTTGGGATGATGATGAATCCTGGACGCCCTCCCTTTAT GGGAGGAATGGGGATTGGTGGTGGAAATCCGCCAAGAGGTGGTAGGCCAGTCAACATGCCTCCAATGTTTCCCCCACCTCCGCCCCCACCTCAAAATGCC AACCGAGTCCCCAAAAGAGATCAAAGAACTAATGATCGGAACGACAGGCATGGCTCAGGATCAGAGCAGGGCAGGAGTCAGGACATGCAGAGTCAAAGTG GTGGACCTGATGATGACATGCAATACCAGCAAGGATACAAGGCAAATCAGAATGATCAGAATGAAGATAGTGAAAGTGAGGATGAAGCACCAAGACGGTC GAGACACGGAGAGGGAAAAAAGAAAAGGGACGCATAGCAGATGCCAACACAAGCTCTGATCAATAGCATATTGATGATCCACTGACCAGGATTCTAGTTT CCAATGCTTTTATTTTCAATGAAATGATGAAAGTTGAAGTTATAGCCATCAACCTAGAGTAAGCAATGATAAAGATGAGATAAGTTGATGTGATAATTAG TGTAGGGAGAAGTTCCAAAACAAATTAACTTTATAATTAGTGTTCTTTCACCCTATAGGTGAGAGCAAGAGACTTCCAGCTATATATATATACATATTTT TATTTACATAAGAATTGACGAATTGAACCTACAAATACACCTTGATGATGCATGTAGCTTTGTGGTTTTATGAACTAATAATATGCAAGATCGTCTAAAT CACTTGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41865; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196457
| Blastp | 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 64.05% of identity |
|---|---|
| Blastx | 30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 73.36% of identity |
| Eggnog | zinc finger(COG5084) |
| Kegg | Link to kegg annotations (AT1G30460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440105.1) |
| Pfam | YT521-B-like domain (PF04146.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |