| Id Trinity | FTRINITY_DN54357_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_197808 |
| Sequence | AAATAATAATAATCAATGAGTGGGATAGGGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGA AATTTTGTTATCCTTTTGGTTTCTGATCGGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGC TTCTTGCAGGAGACACGGTATTTTGCCTAATACTACTATTTTGGCAAGCTTTTTCAAGTACACATGGACAAGAGAGTCATACTTACACCAAACTTTGGTC TTAACCAATTTTCCATTGTATTATGCAGCATGCACTTTTTTCCTTTTACTCCGTTTGTTCATGCAGTTACTTTCCTCGCACAGAGGGCAGTGATTTTATT CCATTTTCTACTTTACCCTTTTCATGAGTGTAAGATGCTAAATCTGACCATGACCATGCAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTG GAGATTTTTATTGATGACCTTAAGGATATTGATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTA ATGAATCAGCATGTGCATTAAATGGAGAATATGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGG AAAAGACTTCTTACGGTATATTATGGTGCTTGTTATGAATTATCTTTGTATGAAGGACATAATTTATGGTAGTACAAAGGACATAATTTATTCTAGCTTT GGTTTAGTTGTTTCAAGACTATATGTGGGAGGTTCATCATCAAGGGGAGATATTAACTTCATTGATTCACTTTCTGGCATTATGTTTTTCTTGCATACGT TGTTTTTTGTGACTAATATCAGGTTCTATTATTAGGGATATCTCAGAGAGAGGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGC TGAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTAGTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAA TCTAATGCGCCTCTCAATGTGCGAGACACGGATTACCAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAA TATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCACCCAGTAGGAAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTA CTGGTGAATCTTTCACTGATTCAAGGGTACCGACAGATCCTAACTTCAGTGCAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAA TCATGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTTGACTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGG TGGAATTTTCAAGTGCCTATTCAGAACGAGAATGAAGATGGAGAAGATTCATCTCAAGGCCACTTTACAGGGCATACCACTGATGTTTCTATGAAGTATA TGTCTTGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCATGATAGCTTCATTATCAAATCTGAAAGTTTTAGATAATTTGACGATCAG AAATAATGACAGGGAAAGGGCTTCTGGAATATATTCTCAATACTTTCAATATCTTCCATATGGATGGAAGCAAAAAGAGAGTGTGGTAAATATCCTACGT AAGCGAGAAATAAAATCAGGCCACATTAAGGTGCGAACTTCCAAGTGTAGACCGTTGAATCCTTCTGGAGAGTCCAAATACTTTTATACCAGGTCTCTAT CTGCTGCTAAAATGGGGTCTTCAACTTGGCCTTCCTTGCACCCCCTTTCTCTATCAGGTTGTGAATTAGAAAGGGGCTTTCGTCCAAGGCAGTTTGAGTA CCATCCATCTGACTCTAGCTTGATGGTCCTTGGAACTCTAGATGGTGAAGTAATTGTTATCAACCATGAGAATGAACATATTGTGAGTTATATCCCATCA CTTGGAGCAATGAATAGTGTCTTGGGTCTCTGTTGGCTCAAACAATATCCCTCCAAGCTTATAGCAGGTTCAGACAATGGTTCCCTGAAATTGTATGACA TCCACCATATACCAAGAAAAAATACTCGCACACATTGGAATTCTGGTTGTGTTACCTTCGATGAGTTTGACCAGTTGACATCTGTTCATGTTAACTCTAC GGATGAATTATTTCTTGCAAGTGGGTACTCAAGAAATGTTGCTTTGTATGACATCAACAATGGGAAGCGCTTACAAGTGTTCACAGATATGCATTCTGGG CATATTAATGTAGTCAAATTTGCAAATCATTCCCCGTCAATTTTTGCCACTTCTTCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAAAAACCAA TATATCCTTGCTTCACTAATTCAAGTTCAAAAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCGATATATTCTAGCATCGGCAGTTGATAATGAGGT TAAACAGATCTCGGCTGCTGATGGTAGGCTTCACTTGGTTTTTGATATAGCTCCCACTGGAAGTTCTCAGAACTACACCCGTTCTTATTACATGAATGGG AGGGACTACATTATTAGTGGGAGTTGTGATGAACATGTTGTTCGTATTTGCTGTGCTCAAACTGGAAGACGCCTAAGAGATGTATCCCTTGAGGGAAAAA GCTTAGGAAGTTCTATGTTTGTTCAATCTCTGAGGGGTGATCCTTTTCGGGTAATCTTTATTTTTTATTGGACACCTTATTTTTTTCTGTCCATTTTTTC TTTGTAAGAGGGTGAGTGTCGGCACAACAGTAAGGTTTTTGCTTAGTGACTAAGGTCAGGAGTTCAAATCTTGAAAATAACCTCTTTGCTTGGTGGTAAG GCTGCGTACTTTTATTTTATTTTTATTGTCTTTGCATTTATATTTTAATTTCTGCCTACTCAGGTGGACTGTTTCTGCTGTCTTGGCTTTGCCATATTCT CACATAGCATTTATGTGATATGTCAAACGTCTACACTTTTTTGTACCTTTTTTTGTGTATTTTTGTCTTCATAACTGGAGATACCTGACACTTGCTGATT CTTATGGTTATGCCAAAGTGACTTTGATATGCTTGGTGTCACAACACAAATCACTCATAATATATGACCCCTTTTTCTCGTCTCTCTTGTGTATAACCAT TTATAACGTGTCCTGAAATGTGATTGACATCTTTGTTTCCTTAGAATCCATTCATGGCATGAAAAATGAAATTGCTGCCAATTGGTATATGCATGTAAAC TACTGTTGAACTGGACGTAATTTAAGGTAATTGTGTGGATGAGATACACATTGTGAATGTTCTGATGGAAAGCAGGAAATAGTATTTATACTTTTATCCT TATTAAGAAACTCATTTCTTCCCTTAAAATAAAAAGAAACTCATTTCTTCAATATAGTGAATTTCTATTCTCTTTCCCTTGTTATTATGATTTGGATATT GTAAAATGGTGTTTTTTTATATGAATTTCAAATGATGTATGCAGGATTTCAATATGAGCGTATTAGCAGCCTACATGCGTCCTGGCTCCAAGTCTGAAAT TGTCAAGATTAACTTACTAGCATCTAGTGGCCATGCCAATGATGATCCTGATGAGGAGCGCCACCGCCCATCCCACAGTCTGGGAGCTTGATATAAGATT ATATATGTACCATACAGTATGTATAGGTGAATTTCAATTGCTGTTTTGGAGAATTATAATTATAATTTTTTTTGTATTAAAAAGCTGTTTAGTTCAGCTT TGCCTTCAAGTAGGTAATTTAATAATACAACGAGTGTAGATAAAGGAAAACATCTGTAATAATTCTATATTATTATATTTGCCTTGATCACACACCATTT GGTGTAAAAATTGTGTCCTAGTTCGATTCAGTTGTAGTTCTTTAAATTACTTGAGTCAAGGTCCTGCTGGGAATAATTTTAACTTATAAGGTGAAAAAGG GAAGGATATTAGCCGCTCTTTCTAATTTAACTCCAAAGAAATAAGAGAATTCTAATTTAACTCCAAAGAAATAAGAGAATTCTTGCACAACACATGGGGT TAGTAACAAAATAACAACACACGTGAAATGTATCTAAAGAGGGGACAATAACAAAGCACATAGGGACAAAGGGGTAGGAAGGCACCAGAAACCTTCGTGG TTGCTGAAAACTAATGGGATAAGTGCATGAACCATTACATGTTGTCTCTTCTTGGCTGGTACAAGCCACCGACTCTACCCATAGTTTATTCTAACGCCCA TGGAACTCAGATTGATCCTTCTGGCTTACATTTTATTTTATTACTATCACCAACTTTGTTAAGGCAATTCCATAGATATCACCAACTTTGTTATTGCTTT TCCCAATTTGCCACCATTTTACAAAGTCCATCATTATATATATGCCATCACAAACCCTATCACCCAATATTAGCAAAACATACAACAATGAAGCCTGTCT TTACCACACTGCTGTTTTGTTCCCTTCTTTTAAGCTTCTCTTTCTTGGAGTCAGCCATAGCATATGAAGATGCATCCTTTTGCAGCAAGAAATGCTCTGC TAGGTGCTCTGTTGCAGGAGTTCAGGATAGGTGCTTGAAGTACTGTGGAATATGCTGCGCAGAGTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAG CACGAATGCCCTTGTTACAGGGACAAAGTTAACAAAAAGGGCAAGCCCAAATGCCCTTGAACTCAAATGAAGACCAAGCCTGAAGCCCCCACTCAGAATA AGAGAAGTGTGTTTTGTGATAGTAATTGAGAAATTTTAGCAGAGTTGGTTCAACTTATTGTTTCCATTAGTGGTTCCTAAGTAATGTTAGATCATTGTTA GTACTTAGTATGCCCATGTCTGTTGAATGTTAGTACTAGACTTGAGGAATAAATTTGTTGTAGTGTTGTTTTTTTTCTCATTTTCTCTGACTTGCTTATA AAACAAACAATATTTTATGAACATGATTCTCTTTTATGCCTAGGATTCTTCTGTATAATTCCTACTTCAAAATCTAAAGCAATGTGATGTGTCGCATGTC ACTGTTATAAATCTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41913; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197808
| Blastp | DNA damage-binding protein 2 from Mus with 26.87% of identity |
|---|---|
| Blastx | Snakin-1 from Solanum with 80.65% of identity |
| Eggnog | WD repeatcontaining protein(ENOG410XRID) |
| Kegg | Link to kegg annotations (107986) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428185.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |