Ll_transcript_197812

• Id Trinity: FTRINITY_DN54357_c0_g1_i14
• Name Transcript: Ll_transcript_197812
• Sequence: AAATAATAATAATCAATGAGTGGGATAGGGAAGAAAAGCTGAAAAACCAACAAAAGAAACAGTGTGAATCTGAATCCGTACCTCGTAGTTTGCATTATGA AATTTTGTTATCCTTTTGGTTTCTGATCGGATAGTTTTTCCATTCACTTTGTGGTCTCCATGGCCATCACCATCCAAACCTTGGAAGACAGGTATATTGC TTCTTGCAGGAGACACGGTATTTTGCCTAATACTACTATTTTGGCAAGCTTTTTCAAGGCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGTAGTCTGGAG ATTTTTATTGATGACCTTAAGGATATTGATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATGCTTCTGAAATTGAAGCTGTTGACATACGTAATG AATCAGCATGTGCATTAAATGGAGAATATGCATTGCCATTGATGCATGCTATTAACCAAAAGCTTCGAGTAGTTGACCTACAGGATCTGTCATTTGGAAA AGACTTCTTACGGGATATCTCAGAGAGAGGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTGAATTTGACTGGGAAGTTCATG CAGATGCACACCCTTGATCTTGATTTTAGTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCG AGACACGGATTACCAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGC TGGGACATCTTTTATCTCACCCAGTAGGAAGTCTGATAGCAGTGTTGATCTTGACCTGCTTAATAGAGTTCCTTTTACTGGTGAATCTTTCACTGATTCA AGGGTACCGACAGATCCTAACTTCAGTGCAGAAGATCCATTGATAAATCTGTATTCCTTTAATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGATG AGGATTCATCAGATGATAGTGAAGTTGACTTCACGAGTCATCGTCATAGATTCTGGCTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCA GAACGAGAATGAAGATGGAGAAGATTCATCTCAAGGCCACTTTACAGGGCATACCACTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATA TGCTATGAGAAGCATTACAGAGAGTTCATGATAGCTTCATTATCAAATCTGAAAGTTTTAGATAATTTGACGATCAGAAATAATGACAGGGAAAGGGCTT CTGGAATATATTCTCAATACTTTCAATATCTTCCATATGGATGGAAGCAAAAAGAGAGTGTGGTAAATATCCTACGTAAGCGAGAAATAAAATCAGGCCA CATTAAGGTGCGAACTTCCAAGTGTAGACCGTTGAATCCTTCTGGAGAGTCCAAATACTTTTATACCAGGTCTCTATCTGCTGCTAAAATGGGGTCTTCA ACTTGGCCTTCCTTGCACCCCCTTTCTCTATCAGGTTGTGAATTAGAAAGGGGCTTTCGTCCAAGGCAGTTTGAGTACCATCCATCTGACTCTAGCTTGA TGGTCCTTGGAACTCTAGATGGTGAAGTAATTGTTATCAACCATGAGAATGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTT GGGTCTCTGTTGGCTCAAACAATATCCCTCCAAGCTTATAGCAGGTTCAGACAATGGTTCCCTGAAATTGTATGACATCCACCATATACCAAGAAAAAAT ACTCGCACACATTGGAATTCTGGTTGTGTTACCTTCGATGAGTTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAATTATTTCTTGCAAGTG GGTACTCAAGAAATGTTGCTTTGTATGACATCAACAATGGGAAGCGCTTACAAGTGTTCACAGATATGCATTCTGGGCATATTAATGTAGTCAAATTTGC AAATCATTCCCCGTCAATTTTTGCCACTTCTTCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAAAAACCAATATATCCTTGCTTCACTAATTCA AGTTCAAAAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCGATATATTCTAGCATCGGCAGTTGATAATGAGGTTAAACAGATCTCGGCTGCTGATG GTAGGCTTCACTTGGTTTTTGATATAGCTCCCACTGGAAGTTCTCAGAACTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATTAGTGGGAG TTGTGATGAACATGTTGTTCGTATTTGCTGTGCTCAAACTGGAAGACGCCTAAGAGATGTATCCCTTGAGGGAAAAAGCTTAGGAAGTTCTATGTTTGTT CAATCTCTGAGGGGTGATCCTTTTCGGGTAATCTTTATTTTTTATTGGACACCTTATTTTTTTCTGTCCATTTTTTCTTTGTAAGAGGGTGAGTGTCGGC ACAACAGTAAGGTTTTTGCTTAGTGACTAAGGTCAGGAGTTCAAATCTTGAAAATAACCTCTTTGCTTGGTGGTAAGGCTGCGTACTTTTATTTTATTTT TATTGTCTTTGCATTTATATTTTAATTTCTGCCTACTCAGGTGGACTGTTTCTGCTGTCTTGGCTTTGCCATATTCTCACATAGCATTTATGTGATATGT CAAACGTCTACACTTTTTTGTACCTTTTTTTGTGTATTTTTGTCTTCATAACTGGAGATACCTGACACTTGCTGATTCTTATGGTTATGCCAAAGTGACT TTGATATGCTTGGTGTCACAACACAAATCACTCATAATATATGACCCCTTTTTCTCGTCTCTCTTGTGTATAACCATTTATAACGTGTCCTGAAATGTGA TTGACATCTTTGTTTCCTTAGAATCCATTCATGGCATGAAAAATGAAATTGCTGCCAATTGGTATATGCATGTAAACTACTGTTGAACTGGACGTAATTT AAGGTAATTGTGTGGATGAGATACACATTGTGAATGTTCTGATGGAAAGCAGGAAATAGTATTTATACTTTTATCCTTATTAAGAAACTCATTTCTTCCC TTAAAATAAAAAGAAACTCATTTCTTCAATATAGTGAATTTCTATTCTCTTTCCCTTGTTATTATGATTTGGATATTGTAAAATGGTGTTTTTTTATATG AATTTCAAATGATGTATGCAGGATTTCAATATGAGCGTATTAGCAGCCTACATGCGTCCTGGCTCCAAGTCTGAAATTGTCAAGATTAACTTACTAGCAT CTAGTGGCCATGCCAATGATGATCCTGATGAGGAGCGCCACCGCCCATCCCACAGTCTGGGAGCTTGATATAAGATTATATATGTACCATACAGTATGTA TAGGTGAATTTCAATTGCTGTTTTGGAGAATTATAATTATAATTTTTTTTGTATTAAAAAGCTGTTTAGTTCAGCTTTGCCTTCAAGTAGGTAATTTAAT AATACAACGAGTGTAGATAAAGGAAAACATCTGTAATAATTCTATATTATTATATTTGCCTTGATCACACACCATTTGGTGTAAAAATTGTGTCCTAGTT CGATTCAGTTGTAGTTCTTTAAATTACTTGAGTCAAGGTCCTGCTGGGAATAATTTTAACTTATAAGGTGAAAAAGGGAAGGATATTAGCCGCTCTTTCT AATTTAACTCCAAAGAAATAAGAGAATTCTAATTTAACTCCAAAGAAATAAGAGAATTCTTGCACAACACATGGGGTTAGTAACAAAATAACAACACACG TGAAATGTATCTAAAGAGGGGACAATAACAAAGCACATAGGGACAAAGGGGTAGGAAGGCACCAGAAACCTTCGTGGTTGCTGAAAACTAATGGGATAAG TGCATGAACCATTACATGTTGTCTCTTCTTGGCTGGTACAAGCCACCGACTCTACCCATAGTTTATTCTAACGCCCATGGAACTCAGATTGATCCTTCTG GCTTACATTTTATTTTATTACTATCACCAACTTTGTTAAGGCAATTCCATAGATATCACCAACTTTGTTATTGCTTTTCCCAATTTGCCACCATTTTACA AAGTCCATCATTATATATATGCCATCACAAACCCTATCACCCAATATTAGCAAAACATACAACAATGAAGCCTGTCTTTACCACACTGCTGTTTTGTTCC CTTCTTTTAAGCTTCTCTTTCTTGGAGTCAGCCATAGCATATGAAGATGCATCCTTTTGCAGCAAGAAATGCTCTGCTAGGTGCTCTGTTGCAGGAGTTC AGGATAGGTGCTTGAAGTACTGTGGAATATGCTGCGCAGAGTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAGCACGAATGCCCTTGTTACAGGGA CAAAGTTAACAAAAAGGGCAAGCCCAAATGCCCTTGAACTCAAATGAAGACCAAGCCTGAAGCCCCCACTCAGAATAAGAGAAGTGTGTTTTGTGATAGT AATTGAGAAATTTTAGCAGAGTTGGTTCAACTTATTGTTTCCATTAGTGGTTCCTAAGTAATGTTAGATCATTGTTAGTACTTAGTATGCCCATGTCTGT TGAATGTTAGTACTAGACTTGAGGAATAAATTTGTTGTAGTGTTGTTTTTTTTCTCATTTTCTCTGACTTGCTTATAAAACAAACAATATTTTATGAACA TGATTCTCTTTTATGCCTAGGATTCTTCTGTATAATTCCTACTTCAAAATCTAAAGCAATGTGATGTGTCGCATGTCACTGTTATAAATCTG
• Tissue: flowers
• Gene name: LI_gene_41913;
• Additional information: details;

Expression of Ll_transcript_197812

FPKM

• FPAB: 0.3
• FPNAB: 8.3
• LF1: 2.1
• LF2: 0.3
• LF3: 1
• LF4: 2.2
• UF1: 3.5
• UF2: 2.7
• UF3: 1.9
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_197812

• Blastp: Katanin p80 WD40 repeat-containing subunit B1 from Strongylocentrotus with 25.37% of identity
• Blastx: Snakin-1 from Solanum with 80.65% of identity
• Eggnog: Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC)
• Kegg: Link to kegg annotations (373369)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428185.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;