| Id Trinity | FTRINITY_DN54365_c7_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_196523 |
| Sequence | CTCTTTTCATTTTTCTCCAACACTTTTCTTCTTCTTCATTTCAACCTTCAACGTTTCATTTATATGCTAATACTTTCAGATTTCAATTCAATTCATGTTT TATACTAAACATGCTATTGCTATTCAATTTCAGCATTTCAATCTTCCTCTGCTAGTTCCACATGATTCTTCAACCACCTTCTGCGAGTTTCCTATTCTCG CACATTTTCTCTTCTACCCTCTGTCCTTGCACCAATCAAGTTAATCACTTTGTTTCTTTCCCTTTGTCCCGAAGAAGAAGACGAAAACGCTTCATTGCGC ATTCTGGGTGTAGGAATTCCCGAAGAAAATTGACCCTTCGTTTCTGTGCTATTCCACCAGATAGTAGTTCCAACCGAAATTGGAACACGGAATTCGCAAA TTCAGCTAGAAGGGGTGCCAAAAGTATCGTTTTTAATCAGATTAGTAATGAAATTGACGAGGATAATGATAGTGGTGCGTCTCGTTCTCAAGAGTCACAA CAGATTCAGTTAGGTTCGAATTTTACCAATTTTCAAGAAGACCCTATTGTAGATAAGTTAAGAACACAATTGGGGGTGATTCACCCAATTCCATCTCCTC CTATTAACCGCAACGTGGCTGGTTTGTTTGTGTTCTTTTTCTTTGTCGGCGTTGTGTTTGATAAATTGTGGACTTCAAGGAAAAGGAACAAAGTTAGGAG TGAAGATAGCTTGCGCAGCGTGTTGACGCAGGTACCAACAAGCTCCTCTTGGGTTTTGGAAAAGGATTTGCAGAGAAAAGAATCAGTTGAATGGGTGAAC ATGGTGCTTGGGAAGTTATGGAAGGTTTATAGAGGTGGAATCGAGAACTGGATTATTGGGCTGCTTCAGCCTACTATTGATGACTTGCAGAAACCTGATT ATGTGCAGAGGGTCGAGGTTAAGCAATACTCATTAGGGGATGAACCATTGTCTGTTAGGAATGTAGAACGCAAGACTTCTCGCAGTGTGAACGATTTGCA GTACAAGATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTATTAATGGTTTCTCTAAAGTTTGGCACTATGCCAATTGAGGTGCCTGTTGTTGTTCAT GATTTTGACATTGATTGTGAACTTTGGGTAAAAATGAGATTAATACCAACAGAACCTTGGGTGGGATCTGCTTCATGGGCTTTTGTTTCTCTTCCAAACA TCAAGTTTGAATTGTCTCCTTTTCGCCGGTTCAATTTAATGACAATTCCAGTGCTCTCAATGTTTTTGATTAAACTTCTTACTGAAGATTTACCCAGACA ATTTGTATACCCTGAGAAAATTGATTTGGATTTCCAAATGGGAAAGACAGTTGGTCCTGTTGCTAACGATGTTAAATCTGGAGAGATGCAAGATGGGAAA AAAAAATATGTTGGCGAACTATCTGTTACCCTTATGAATGCTCGAAAGCTTCCTTATCTCTTCCATGGCAAGACAGATCCTTATGTTATTCTTAGTCTTG GAGATCAAATTATAAGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCAATTTGGAACCAAGATTTTCATATGCTTGTCGCCAA CCCTAAAAAGCAGAAGTTACTTGTCCAGGTTAAGGACTCTCTGGGATTTGCAGATTTGACTATTGGTACAGGGGAGGTGTGTATTATATGCCATACCATA ATTTTTGTGACTTGTTATTTCACATTTGCTCCACTTAATAGTTTTGTACTTCTTTCATAGATTCTTTTAGCTATTGGATTTTCTTTGAGGTCTTGATACT TAGCTTCTAGTCTACCCTACAGTCGATACTGTTTCATGAATGCTTGTCTAACTAAGAAGTGCTTAGCAGATTCTCCCTCCTTTCCTTGTGGTCCACTTTG AGTTACCTTTCTTTTATTCTTTTTTTCTGATTATTATAAATTATGTTGGATACTAGCTCTTGATCAGCGGTGTTTTTCTTGTGTTGATGGTGAACTGAAT ATTTTGTTGAGGTGGGCTGGAATTGGTTGATGTTTGTGAGTTGATCTGTAATAAGCAAAATAAACCTCATATGATGTGGTGATTGTGGATTGGTGAGATT ACTTTTTAGAAGGGGTCGGTGATTATTTTCTTAGGTTAAATGCTTGAAAGGCTGTTTGTGGATGCACCATATTTTATGCCACTTATTTTGACATCTCCGA TGTATAGGTTCATTGAGTCTTTTGGAGTATTTCAGGAATGGGTGATTATCTTGGAGTGTTCTTGTAATTTTGCGATACCTCTCGCAAACAACTGAAATGT ATAAAAATAAATGAAAAACCCAATGTGTGGACATGGGAAAAAACTGGAATCAAAGGAGTGAAATTGACATCTCTATGTCATCTAACTACACTTTAGCAGA TAGTATATCCACCATTTTCACTGCACCACACCATGAGGCTATGATAAAGTTCCCGTAAAATAATGCTTTAATATGCCAGGGTGCCACGCCTTTCCAACAT TCAGAGAAAATGATATTTTTTCTTAATGCTGTGAAATTATTTCTTTTTATGTCATTAGAGTACTTTCTTGAAAAGTAAGCTATATCTTTTCTATCAGTTG CAACAGTAAAGTTCGGCATGTAGTATAATGTAATATAAAAGTTATTTTAAGAAATAACAATTTCTTTTGTTATTTAAGATTGTGTAGAATCTTCAGTTGC CATGTTTGATTCATATGTTGGATAGTAGGAAGTTGAATGAAAAAATGGAAATATAATTTCGTATTTAGCTCTAGTATATATGTCCATGTGTGTGTGTTTT AATTGATAAAATTTTCAGGTTGATTTGGTATCTCTTAAAGACACTGTACCAACAGACAGGATTGTGGCTTTACAAGGAGGTTGGGGAATTTTAGGAAAGG GTTCTTCTGGGGAGATACTACTACGGCTAACATATAAAGCATATGTGGAGGATGAAGAAGATGACAAGACTGAGATGGATGCCATTGATGTAGATGCTTC AGATGACGAGTTGTCTGATTCAGAAGAAGCCAATGTCATTGATGAGACGAATGAAGGAGATCCTATGTACCGAACTGATAATGAGTCATTTATGGATGTA TTAGCAGCATTAATTATAAGTGAGGAATTCCAAGGAATAGTGGCATCTGAAACTGGGTCTACCAAAATTTTGGATAATAGCTCAAATACAGGCTCCAAAG TATCAAAGTCTACTGTTGCCAATGCTGAAACAATTTCTTCTACTTCTGACAACTCTGAAGGTTTTGTAGGGTCAGCATTATTTTGGTTTGCTGTGATTAC TAGTATATCACTATTAATTGCAATCAACATTGGCGGTTCAAGTTACTTCAATCCTTGAGATGGTATTGTGCTGCTTGCATTCCAAATTTTGGTTCTGCTC AAGTAATTGATCAATGAAATGAAGTCTGTTTTTCTAGTTATAAACTCTGACATAATAATGATAAACCTTTTCCCATGAGAAAAATCATCTGTTTGCATTG TATGGTTATACAATTGGGTAGTCATTTTTGTATGATCATTTTATAAATATGCTAATGCCAATGTTTTTATTCTTTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41964; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196523
| Blastp | Synaptotagmin-3 from Arabidopsis with 24.92% of identity |
|---|---|
| Blastx | Synaptotagmin-2 from Arabidopsis with 23.4% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT5G04220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450948.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |