| Id Trinity | FTRINITY_DN54365_c7_g2_i19 |
|---|---|
| Name Transcript | Ll_transcript_196533 |
| Sequence | CAAAATTATCTTCCTGAGATCCAAGGATATAAATACATTTTTAGGTTTTTGTTATTATGTATGTTATGTTACCTTTTCTTTGTACCATTTTTGTATTTCA ACAACTTGATATTACCTATAACATGTTTAATTTTCCATTGTTTTGTCTAGGTACAAGATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTATTAATGG TTTCTCTAAAGTTTGGCACTATGCCAATTGAGGTGCCTGTTGTTGTTCATGATTTTGACATTGATTGTGAACTTTGGGTAAAAATGAGATTAATACCAAC AGAACCTTGGGTGGGATCTGCTTCATGGGCTTTTGTTTCTCTTCCAAACATCAAGTTTGAATTGTCTCCTTTTCGCCGGTTCAATTTAATGACAATTCCA GTGCTCTCAATGTTTTTGATTAAACTTCTTACTGAAGATTTACCCAGACAATTTGTATACCCTGAGAAAATTGATTTGGATTTCCAAATGGGAAAGACAG TTGGTCCTGTTGCTAACGATGTTAAATCTGGAGAGATGCAAGATGGGAAAAAAAAATATGTTGGCGAACTATCTGTTACCCTTATGAATGCTCGAAAGCT TCCTTATCTCTTCCATGGCAAGACAGATCCTTATGTTATTCTTAGTCTTGGAGATCAAATTATAAGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGG CCTCCTGGAATGCCGATTTGGAATCAAGATTTTCATATGCTTGTTGCAAACCCGGAAAAGGAGAAGTTACTTGTCCAGGTTAAGGACTCACTTGGGTTTG CAGATTTTACTATAGGTACAGGAGAGGTTGATTTGGGATCTCTTGAAGACACTATAGCGGCAGACAGGATTGTGGTTCTGGAAGGAAGTTGGAGAATTTT AAGAAAGGATTGTTACGGGGTGGTATTACTACGGCTAACATATAAAGCATACGTGGAGGATGACGAGGATGACGAAGTGGATGAAGATGCCATCAATATA GATTCTTCAGATGATAAGTTGTCTGATTCAGAAGAAGCACATGTCACTGATAAGAAGAATGAAGGAGATCCTATGCACCGAACTGATAATAAGTCACTTA TGGATGTATTGGCAGCATTGGTTGTTAGTGAAGAATTCCAAGGAATAGTAGAATCTGAAACTAAGTCTACCAAGAATTTGGATAATAGTTCAAACACAGG CTCTAAAGTATCAAAATCTCCTGTTTCCAATGCTGAGTCAACTCCTTCTTCTACTATTGATAACTCTGAAGGTTTTGTGGGTACATTGTTTTCTTTTATA ATGGCTCCTTTTTCATTCCCTTTCCCTTTTCTTACTGTTACATTCTCTTATTTCGAAGATGAGCCTCAGCGCAATGGTAAGGTTGTTTGTCTTGTGACCT GTAAGTCATAAGTTCAAATCCTGAAAACAATCTATTCGTATATGAGATAAGGTCATATACATCCACCATCTCGAGCCCCGCTAGGTGGGAGGCTTGTGTA GCCGACAACCATTTATTTATTTTTATAATATCTTACTTTTCCTCATATAATATGATGTATTATGTCAAGGTTTATAGTCATTAAAGATTGTGTTGTGTTC ATTTAAAAAAAAAAAGTTGTAACCGCAGGGTCTGCATTGTTTTGGTTTGCTGTGGTTACTGGCATATCACTACTAACTGCATTCAACATTGGTGGTTCAA GTTACTTCAATCCTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41964; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196533
| Blastp | Synaptotagmin-2 from Arabidopsis with 24.22% of identity |
|---|---|
| Blastx | Synaptotagmin-3 from Arabidopsis with 25.35% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT1G20080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413265.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |