| Id Trinity | FTRINITY_DN54373_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_196864 |
| Sequence | AAAAAAGTTAAACATTCACTATTGTTTTTTCGGTTTTTTGATTTAACACAGTTGATAGTAGATAGTTTGGGACATATTTAGAGACTTCTTCATCAGTTTA CCTATAGCCTCCGGTCACCTGCATGAAAGAGAACTTCTTATAAGGCGTTTCAACAATCAACAAACGTTTCAGAATTTTCGTTCACAAATCCGAACAGAAA GAAACTACGAGAAAATTTCTACTGAGCCTCAATAGTAAACGGAATTCGTTAAAAAATATATCTTTTTGGAATAAAATAGCGTTTAGCTCAAAGGGTCTCT TTAAAACATCTGATTTCAATCGTTGTTGTTGATTCTTTTGGTTTGAAAGAAGAAGAAGCATAGGAACATGGTGGCTGATGTGGACCTTGTGTGTAAACAG AGCGTGGCTACGTTGGATGTGAAGTATTTTCCAAACAAAGAGATAAAAAATCATGAGATCGAAGGTGAACATGCTATTTCACCTCCGAGTTTTGATCGAG TTCGTGCTTCTGAGTCAGTCTCGGCCAAGTTATCTACTTCACTAGAAGTCAGTTTTTCAGAACCCCTTTTATTTGTTTCCATGTGATTTTCTATGTGTTT ATGTTATTGCATGACATAGATGATATTACAGCATGATGTTTTTTTTCTTCTGTTTTCTGTTGTTTGATTTCTCAGATCGAGGTCCCAACGAAAGAACTAA AACTTAATGATCTAGAATCAACTTATTTATTGAGCTTAGGTGAAGTCATAAACATACCTGATCTATGCAGAATTCTCTCTAGATTGTACTTCCTTATGTG ATGTGTCACTTGTTTAATTTAGGAATCTATGTTTAGTTTTAACGCTTATTTATGTCGAACACAATTGTTGAGTGCAAAAGTAACTTGCTAAAATGGACAT CAATGCTTACATAAATATGAACGGTTGATCTTGATTATGAAATTATACATCAACACCCTTTTGGTTTGTTTATTTTTAATTTTAATTTTATTAATATGGT TTCTAGAGCATGATTTTTTTTATGTGATGCAACAAGATTTGTAAATTAGCATGTTCTGTCCTCCAATAAATATACTTATTCTCATTTTCTAATTTTCATG TACCCTGATGTAGGATGTTAAGCCTGGTGATAGAATCTCAGATGATGCTCTAGAATCTGCTGTTATGCAATTTGTCCCCTGCATCCGTTCTGGTAGTTTT GTTGACATCGGGCCACGAAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCTCACCTAGGATCACTATACAACTTTCCAAAACCAAGTG CCTTTTATGGAGTAATTAACTTTTCACCCTGACTTTTTGATTTTTTTGTAATCTTATCATACATTTAATTGAACTTTGGCAAATTACTTAGGTGTTTGAT GGTCATGGAGGACCAGAGGCTGCAGCTTATGTAAGGAAAAATATCATGAAGTTCTTTTTTGAGGATGCCAGCTTCCCTCAGACATCTGAAGTTGATAATG TATTTTTACAAGAGCTTGAGAATTCCCTCACAAAGGCGTTTCTTTTGGCTGACTCGGCTTTGGCTGATGAATGCAGTGTGAATAGTTCGTCGGGGACCAC GGCCCTTACAGCTTTTATATTTGGACGGCTCCTAATGGTGGCTAATGCTGGTGATTGTCGAGCAGTTCTCTGTCGTAAAGGTGAGTCCATTGACATGTCT CGTGATCACAGGCCTACTTATCCATCAGAGAGGAGGCGAGTTGAAGAATTGGGTGGTTTCATAGATGATGGTTATCTTAATGGGGTTTTATCTGTAACTC GAGCACTAGGGGACTGGGACATGAAGTTACCTAAGGGTTCTTCCTCACCTTTGATTGCAGAGCCTGAGATCCGGCAAGTTATTCTTACAGATGATGATGA ATTCCTCATTATAGGATGTGATGGCATCTGGGATGTAATGTCAAGCCAGCATGCTGTTAGCCTTGTACGCAGAGGCCTGAGGCGGCACGATGATCCAGAA CAGTGTGCAAGAGACCTGGCTATGGAAGCATTGCGCCTGAACACATTTGACAATCTCACTGTAATCATTATATGCCTCTCTTTCCTTGATCACAGAGAGC CATCCCTGCCTCGCCAACGGAAACTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAACTTGAGAAGCTTGTTGGAAGGTGGTGCTAGCAACTGAAT GTATATACAGTATTACATCAAATAAAGTGTTGTTGTGGAAATTATTTATGCTGTTTTTGGCTGCTTCAGTTTAGACATTGAAAAGGCAGCCATCATTTTT TGTACTTGTCAATTGATGTACATAGCTCGGGTTAGAAGATGGTGTTGTTGTAGATATGTAATGTTGTTACATTATTATTTTGTATCAATAATTTTTTTTT GGAATATCTTGATATGTATTGCATTGTTATAGTGCTAATTATCTTATGTACAATTAGTTTGAGCATAGGATCAATAAGCAATTAAGTCTCCAGATAGCTT GAAATTTTTTATTTGGTCAAATGAGTGCATAACTGCTCAGTACACCAATTGAAAATGGCTTGAAGGGTGGCTGAAGCTGAACCCAGAGCAAGGGGTGTAA GGTTGGGATAGTGGGTTTCAGAACCATAGTGTTTCCATAGTGTTTTGATGCTTGTATTTTACAATAAGAACGTGCTTTCAAGGAGTGATAACTCTAATAA AACTTAAAAATGATGACAAGGTTTCATCCAATGTTTGAGAGAAGTTAGCATAAAGTTAGATGAAACAGAAATATGGCAATTTACTACAGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42023; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196864
| Blastp | Probable protein phosphatase 2C 49 from Arabidopsis with 66.53% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 49 from Arabidopsis with 68.05% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT3G62260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452334.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |