Ll_transcript_197682

• Id Trinity: FTRINITY_DN54389_c0_g1_i6
• Name Transcript: Ll_transcript_197682
• Sequence: CACCGTATTCTCTACGCGCAAAAACCATGACCACTTCCTCTGCTTCCTCTCGCAAGAATCTGAGCAAGATTGCATGCAATAGGCTTCAGAAAGAGCTTGT TGAGTGGCAGGTAAATCCCCCAACTGGTTTCAACCATAAAGTCACTGATAATCTCCAAAGGTGGGTTATTGAAGTGAGTGGTGCTCCTGGTACACTTTAC ACCAATGAGACCTACCAGCTTCAAGTTGACTTTCCTGAGAACTACCCAATGGAAGCTCCTCAGGTAATATTCTTGAATCCTGCTCCCATGCATCCTCATA TCTACAGTAATGGCCATATTTGTTTAGGTATGTCTGTGTTGGTTTCATCATGTTGCTAATCTTCAATATGTTTTCATTTACACTGTTTTCTGGTCTAAGT CTAACCATGTAGTTAATGTTGTGCCTGATTTTTATCTGTGTTCTTCTATAGCTTTTTATTGCGGGGTTTTGGCTTGTGTTACATACTTACATGTGTGTTT GTTTACATATCAGGATTTGTTTGGAAACTCAATTGAAAATAGATTTTATTGTAGAAGTTAATAAACCTCAGAAAATATGTGGAAAACAAAAGAATATTGT AGCGCCTTGTTACATGTGCAAATGTATGTCTTCCTGATTTGATTTGTCCAAGATTCTAATTCCGATGTTATCTCAATACAAGTTTGAATAGCTAGGAATA TGATTTAATGACCATAAGGATAACTTGGCAGAATATGGGAAAACTATGTTATACTGTATGTGAGAAATAGTAAGGATTGTGGTGCTTTGTCGATATCTGA CATCGATGCCTGTATGGAAAACGTCCAATTTCTGTTTTTGGTGATCATTATGAAAATTTCTTAATTAGTTTTCATGCTGGACTGCGTCGTACAATTTTCA GAATTTGGTATCTCCTTGTCCATGACGTGTTGCCCATTCGTGTCAATGTTTGTGCTTCATAGCTGTTGTGTTTCTGTGCCTGCATATATTGTAAAGTAAA TTTCAAGCTTCTCATCCATATTTACAAATGTCTCTGGAAGGAATTGACCTAGAGTTTGTGCTGCAAAACGGATTTAAGAAGCATTAACTCATGCTTCTAA ACTGTTTGATGTTGTCTCAGTATGTGAAGTATGTAAGAATTTGATGTTCAAAGAGATTTACTTTGAAATAATAGATGATAATGTTCTTATTCTCATTTGC ACCCTTGATTTTAAAGTAGGAGCACCATCTCTGAAATCCCGTCCATTTTAGTCTACCATACTTTTTGCTAGTGAACTGACATTTAATATGCTTTGGATTA TGCAGATATATTGTATGATTCATGGTCCCCAGCTATGACCGTTAGTTCTATATGCATCAGTATCCTTTCAATGCTTTCAAGTTCAACTGTAAAGCAACGC CCTGAGGATAATGATCGCTATGTGAGGAACTGCAGAAATGGCAGATCTCCGAAGGAGACAAGGTGGTGGTTCCATGACGATAAAGTATAACAACTACTTT CTCGAACAAGTGAACAAAATTAGAGTAGAGAATTATGTTTTTGAAAGAAAATGGAAGGAGACGTGGGGAAAAGCTTTTTCGGAAACCTGAATCCCTTTAA ATTTATGCATAAAACTCTCCTGTAAATTGGCATTACCTGGTATTTGTAAAGGAAGACAAAACTGTGTCTAGAAGGATCTCAAAAGAGTAATCAAACTCAG AATACTGTGGTTATCTCAGGTATTTAGGTGTGGATATTATGGATACGTTTATCATCCCTCACATTTGATACCACGGTTTGGTTAATGCTTTTCTTTCTTG AGAATTATGTTCTAAATATCCTCGAATTTGCAATATCAACTTATCGAGTCTCAAGATTTTAACTGTTTCTGCC
• Tissue: flowers
• Gene name: LI_gene_42128;
• Additional information: details;

Expression of Ll_transcript_197682

FPKM

• FPAB: 0.6
• FPNAB: 0.9
• LF1: 0.9
• LF2: 0.1
• LF3: 0.5
• LF4: 0.3
• UF1: 0.7
• UF2: 0
• UF3: 0.3
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_197682

• Blastp: Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 75.21% of identity
• Blastx: Probable ubiquitin-conjugating enzyme E2 16 from Arabidopsis with 82.35% of identity
• Eggnog: ubiquitin-conjugating enzyme(COG5078)
• Kegg: Link to kegg annotations (AT1G75440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422424.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;