| Id Trinity | FTRINITY_DN54390_c3_g10_i1 |
|---|---|
| Name Transcript | Ll_transcript_196946 |
| Sequence | ATTCTTTTAAGATATTTCATTACGACTAGAATGGATGTTGAGCTATATGAGATTTAGGTAAGTTACAATTACACGCAATTTTGTACAGCTATTCCATTAT TACATAATCTTGATATTAAGAGAAGTATGGGGATTCATATAGTTGTAATAATATAACTTTGAATGTGATTCTAAAACTAAAATAAAAAATGTTTGATTAT CATAATTGGGTATAAAATTTAAATTTTCCCTTATAAAAACTATATGATGGCATTAGTCTTCATTAAATATTTGAAGTGATTTTTGACATCAACGAGGGAA GAAGAAACTTTCTTCTGTCTCACCCACATTATAAGTCACTTTATGCGTCATGAGCTATGATTAATTGAAATAAATATATTTAAATTAAAATTTTAATATT AAATATTTTTTTAATCAATCATAAATACAATTTTAGAGATAAAATATTTGCTTCCCGTTCTTCCACTTGAGTCTTTAACTGTTCCTATTACTTCATCCGT TTTTTGTTTTCATAATTTTCTCTCTCCTTATTTTCATCTTAATGTTAACCATAGTTCTTGTTTTTTCTCTCTAATGCTAGAAAGTGTAATGTAAAATCTC TTTGTTTCTGAGCAAAGCATTCAACTTTGTTCTCATCGTTGTGTGAATCTTCATTATCACTGTTTTTGAGGTTGAATATCTATCTGGGTATTCATTAATT TCAATGGCACAAGTTGAGAAAAGAGAAAAAACTCATCAAATTTCACCAACATCATCATCGAGAAGCAATTACCCAAGAGATCTGTTACAAAGATTCACCA CCATGAACCATAATAATGATAATCATAGTCATCATAATCATGAAGAAGAAGAAGAAGAAGAAATTGAGCTAAGTCTTGATCTTTCAATGAATGGTCGTTT TGGTGTTGACCCAACAGCGAAAAAGATAAAGAGAACAACATCAATACCAGAATTCGTGAACCCAATGAGAATAAGAGATCATGCAGTGGAAATGGATAAT AATTGCAGTACCAATCTCATTAGAACATGTTCTCTTCCAACGGAGAATGAAGAAGAGTGGAAGAGGAGGAAGGAGTTGCAAACACTGAGAAGAATGGAAG CTAGAAGAAAACGTTATGAGAAGCAGAGAAATTTGAAAGCTATGAAGGAACGAAATCGTGGTGGTGGTTCTTCTGAAGAGATGAATGGTTCAGAAGAAGG TGGTGGTGGTGGTGGTGGTGTAGATGAGTTTAACAGTTTGAAGAGAACGACATCGTTGACTGCTAAAGTTGGTAGACTTGGTTTGAATGGGCTGCCACCA CCGTCGCCATCGCCGCCTCCGGTTTCAATTGGTTCTTCACAGGGAACAACAGGTTCTTCAGTAATTTCAGAATCTGAGTCTCAACAAGGTCTAGGAACAA AAGCAGCAGATGCTAGGAGCCCTATCGGTGGCGACTCATCGCCAGACTGCGAGCAGAAATCACCTCCAGTAACATTGAGAAATCAGCTGAACAATCAGTC ATCACCGGAAAACAGAACCGAAGACACGGTGAGGAACTTGTTGGAAGATATGCCTTGTGTGTCTACCAAAGGTGACGGCCCCAATGGAAAAAAGATCGAC GGTTTTCTTTATCGATATGGGAAAGGCGAAGAAGTGAGGATAGTGTGTGTATGCCATGGCAGTTTTCTCACCCCAGCCGAGTTCATCAAGCATGCCGGTG GTGGTGAGGTTGCGAACCCGCTGAAGCATATTGTTGTTAGTCCGAGCATGTTGTAACTCTTTTGAGAGACCTAAGAGAAGGTACCAAATGATGAGCATGT TATAGTTATAGTTAACTGCATGCATGTAATGTGTAAGTTCTTTTTTGTGTCCTTTGAGATCATAGAGATACTATGCAGGATTTGATTTCTTTCTGATTAA GTATCCATCACCATTGTTCTAATGTGTTTGAACACTTTGAGGGGATAATGGTACAAGTTAGAGTTTGATTTGGTACATTTTTGTTAGCTTGAATGATTTA CATTAGTAGCTTTTTGATTAATTTTTATAATGATTTGGTAAATTAATGTTCTTCTATC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42133; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_196946
| Blastp | Ninja-family protein AFP2 from Arabidopsis with 40.94% of identity |
|---|---|
| Blastx | Ninja-family protein AFP2 from Arabidopsis with 37.35% of identity |
| Eggnog | ninja-family protein(ENOG410YWGT) |
| Kegg | Link to kegg annotations (AT1G13740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429618.1) |
| Pfam | Ethylene-responsive binding factor-associated repression (PF07897.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |