| Id Trinity | FTRINITY_DN54405_c0_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_239108 |
| Sequence | TCTCAATCATAGCTTAGCCTTTTTTACATCTGATGATTTAGCTTCTTCTATTACTGATCAGATACTTATATCGAGCTAGGTAACCTACTCTTGCTGCAAA TTTAGATATGAGATCCCTCACTCTTCATATTTGAACTTTAGCTTCTAATGACTCTAGACACTTATTCTGATAATCTCGTAAAACTGGTCTGCTTGTCTAC ATAGAACAAGTTCTGTTTGGCTTTTGTGACTGAGAGCGTGTTTGGTTGAGGGAAAGGAAGGGGAAGGATTCTTTTAATATTTTTTTTGTTTGGTTCAAGA TGTTGAAGAGGAGGGTGCCAAAGCCCCTCATGACTCAATTTTGGTTCCCCAGTTTGATGGATTTGGAGGAGAAAGAAGTTGCAAAACAACAACCAAGTCT TTATTTTACTAGGAGCATGATGGTAATCTTAACGAAGCAATCAATGCTCATTTTAGTGAAGGAGACACAACCTTGATGACCAGCACTCATGAAACCTCCA CCCCTGTTCCTCAAGATGATTTCATGGATACGGATGATCAACTTGATGATGAAATTCACACACGTCCACAACTTTTTGCTAGAAATCTCAGTTCAGTTTG TCTTGTTAATCCAACAATTGGGAGAAGTATATTTGATAGTCATCTTGGTTCTACAAACCAGGCACCATTTGTTACACATCCAAGAGAGGTAAGGGAAATT CCGATAGAGGTTAAGGATGGTAATCAATCCACTCCTCAAGCTGGTCATGTTCCAATCATTGAAGATGTCACCGGATCTGTACGTGCCCATGGTCCAGATA TTCATGGGACCGTCATTGTTAATGATGAAGATGATGATGACACTTCACGTGCCCAGACAGCACATTGGGATGATCAAAGGCATAATGAGATCTTGGCTGA CACTTCACTTGACAGCAGTGTTAGACCTAGTGCTCCTGAGTTTGAGAACTTGCCAGAGCATAGCAATGACATAGAAGAAGAGATGATTCGTGCCGCCATT GAGGCTTCTAAACGGGAGGCTGAGGAAAATTACAGAAATCAACAACTTGGAAGACAATTTGACTTACGTGAATCTGGGCCTAAGCCAAAGCAATCTTGTT TGGAGGATCATGATCTTGCCCATGCAGTTTCATTGTCCTTGAAGGCAGCTGAGCAAGAGAATGCACGGCATGTGCAAGGAGGAGATTTTGGAGCACCAAC AAGTGGGTCATCTAAGTCTTCAGAGGTTGAACTAGGGAAACTGGCATCAAATAAAAAGTAGATTCTCTTTCTTTCAGTTTATTGTCGGACTGTTGCTGAT GTGCTCTGTTGCATTGGCTGCACTGAACACGAGATTTTCCCTAAATATGTTCTTGTGTGATTGTCAAAATCTGAAAGGCGCAATCGTAGTCATTCTAGAT TCCAGGAAGGATGTTCATCCTTTCAAGATGAAGCTGAAGATGTAGAGGAGCAGCCTCAGGTTAGGAACAAGACTAGACGTATTCCTCTCGGCTCTACAGT AGTGGCCAGAGAGGATGAAGTTATTGAGGTTGACACTCTGCCAAGCATAGGACAGGAGAGCAGTTATCCTCCTCAGCATAATGAAAATTCCTTCCACACT GATGAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCAGTGATGCTCGAGGCTGCAATTTTTTGGGGAATCCCAGAAGGGAGTTATCGCCATGCTT CTGCACCACATGAGTTCATGCAGGGTAGGGGTTTCAATCCTCGGCCCACGTATCGCCCACCTTCACCATCACTGACAGCTCAGCGCCTGATAAAGGAACA GCAGGATGATGAATATCTTGCATCGTTACAAGCAGACAGAGATAAAGAGTTGAAGGCCATCGAGGAAGCTGAGGCTGCTCATGAAGAGGAAAGACGCAGA GCAGATGAATCTCGTAGGAAATTAGAAGAAGAGCAGGAATCAGATAGACAGTTGGCGGCCAAAGCAGTCTCTCTACCACCTGAACCATCCTCAGATGATG ATAATGTTGTGACCTTACTAGTAAGAATGCCAGATGGCAATCGTCGTGGACGGCATTTCCGTAGATCTGATAACCTACAAGCTCTTTTCGACTTCGTAGA TATTGGCAGGGTGGTGAAACCAGGCAGTTATAGATTGGTGAGACCATATCCTAGGCGTGCTTTCAGTAATGAAGAAAGTGCCACGACATTGGAAGAACTT GGCTTAATAAACAAGCAAGAAGCCTTGTTTTTGGAGTTAATCTAATTCCTTGAAGCATATGTGAAAAACATTTGATTGAACTTAGTTTATTAAATACGAA TCTAATGTGTTATTTTAATGAGGGTCTGTGATGTTTGGATGGAATGAATTTTCAGATGTACAAAATCATCAACATGAAGAAGTGTGATACCATCATGTAT GTGACTACTAAATATTGAAGGGAATGATTTCTATCTTATACCTTATGATTGAAATAATTCATATTAATGAATTTAAAACTATAGCTTTCATTCCCCTTCT CCCCTATC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42298; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239108
| Blastp | Plant UBX domain-containing protein 13 from Arabidopsis with 36.75% of identity |
|---|---|
| Blastx | Plant UBX domain-containing protein 8 from Arabidopsis with 38.76% of identity |
| Eggnog | Fas associated factor family member 2(ENOG410XSFS) |
| Kegg | Link to kegg annotations (AT4G23040) |
| CantataDB | Link to cantataDB annotations (CNT0002280) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422626.1) |
| Pfam | Ubiquitin interaction motif (PF02809.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |