| Id Trinity | FTRINITY_DN54409_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_237709 |
| Sequence | GGACCAGCCTCTGCTGTCCCAAACCCTGTTCCAAACCTGTACCAAACCAATAACAATATGACATGGTTGATGACATGTTTTGGAACATGTAATCCTATCC TAAATAGAAGACTATGTTGAACATTTAATAATGTTGATTCTTATCTACTAGGCACCTGCACCTACTATATTATGTTTATTTACAATTCAACAACATCAAG TGTGAAGTGTGAAGCCGCTTCATTTCTGTTTATAATTGTTTTTCTTTAGCCGCCTCTCTCTCCTCATCAACACTGTGCTCATAACTCATAATCTCTCTTC TTTTGCACTACCCAGATCCCAATATATCAACTTTCCTTTCTGTTCTCTGCAAAGATTTCTTCTTTTGTCTTTTTTACATGGTTTATGAGAACATCAGGTT TTGAACAAAATTGTTGAAGCACAGTTAAGACAAGGGAATTTCTCCTTTCTTGAACTTTGCCTAAATTGACCTTTTTTCATGTTGCCTCATCAATTCACAG TAGCCCAAGTTAGTGAATTGGGCTAACAACTAAGGGGTTTGAAGTTCTTGGTAATCAAGATTCATGTTTTATGATAAAGTATGATACTTGATCAGGATTC CAGTGGTTCTGTTTGGTTGTGAGGTGTACATCAAGGACATGCTTGTTCTCAATTAGTGAACAGAACAATAATTGGATTGCACTGTTTACTTAAGAAGAAT GGCTATGGCTGCATCATTCTTGTTGCTATTCTTGAAATTGTCAACAATTTTCAGCTCTGCAGTTATCTTGCAATCAAGGGATTGTGGCAATAATTGGTTA GCTCATTCATATTCTTCTTCTGGTGAAGATATATTTTACATAAATGGGAATGCAGTAAACAAAATTGCTTTCTGTGAGGCCTTTCAATTGTATATCGAAA ACGGCTGCGATTTGAAGGACTACTTTGGAAGTAACAACTGTGCCTTGGATGCTTCTTTTGGTATGAGTTTGCAAATAAATTTACCTTCAAAAGCAGGCAG AAAGCTTTTGCAAAAAGATTTAAGCAATGAACCCACCACATCTCAAGGAGATTCTAAGCCTTTGCCAACCTCCAATGTTGGTATTTTTGCAGGTGGGGCT TTGTTAGTATGTTGTGTTGTTCTCTGTCCTTGCTTTTACGCGACGAGACGAAAAGCAACCTCTCATGCTGTTCTTGCCAAGGATCCGAATTCAATGGATT CAGTTTCCTCCTTTGAAGGAAACTCAGTTTCTGTTAAGGTCCCGGCAAGTCCTCTTCGGGTGCCACCCAGTCCTTCAAGATTCTCAATGTCTCCCAAACT CACTAAACTTGATTCCTTACAGTTCAACCTGAGTCAGGTTGTAAGAGCTACCCGTAATTTCTCAGAATCATTACAAATAGGAGAAGGTGGTTTTGGAACT GTCTACAAGGCCGAGTTAGAAGATAATGTGATTGTGGCTGTAAAACGTGCAAAAAGGGAACAATTTGAGAGTTTGAAAACTGAATTCCGCAGTGAAGTTG AGCTTCTGGCCAAAATTGACCATAGAAATCTGGTTAAGCTACTAGGTTACATTGACAACGAAAATGAACGCATACTTATTACAGAGTTTGTGACGAATGG CACTCTTCGAGAACATTTGGATGGTCTGCGTAGAAGAATCCTGGATTTCAATCAGCGCCTTGGAATTGCTATTGATGTTGCTCATGGCTTGACCTATCTG CATCAGTATGCAGAAAAGCAAATTATCCACCGGGATGTGAAATCATCCAATATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTG CAAAGCTTGGTCCAATGAACTCTGATCAAACACACGTTTCTACAAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGACTATATGAAGACAAACCAACT CACTCCGAAGAGTGATGTTTATTCATTTGGGATTTTGCTTTTAGAAATTGTGACAGGCCGGCGTCCCATGGAGTTAAAGAAAACTGTGGAAGAGCGTATT ACACTAAGATGGGTAAGCTCATGATTTGTTCTCCTTATATTAGAATTTGGAAATCTACATTCTCGTCGATTGAAAAGTGAAGCCAATATGACTTATTTAT ATAAAGGAAAAAGGAAGCTTGTAAACCAAGCAACTAATCAAAATGGTTACAAACCTAAGTGACTAAGTAATAACTTCCTAACCACCAACCATGTTCTAGA ATAATCTCTAAAATATCTTCAATACCTTAAGATGAATTTCATGTTTTAGCTGGACATTTAAATTTTTGTGTATTTCTAAAAGATGATATCACATTTAAGG CATACAAAAATCCATGCACAAATATTTATTTGGTCTTGTACTCCTGCATCATTTCACTATGGTCAACTGATATCTTATAATTGGATCGAACTAACTGATT TCCTCCTTAGAAGAACAATAGTATAATCTTGTACCTTTTGGACTTATTTATGCATGGAGGATTATGTAGTGAACAAGAAAATATGGTAACAACAAAATGC ATTTGTAGTTGCGGCTGCTGAGTAATTATTTTGGTATTAGATCAAAAGTTTGTTGTCTTCATTCATTCTGAAGCAGTCAAATTATGTGCAGGCCTTCAGG AAGTTCAATGAAGGGAGTTTTGTAGAACTGGTGGATCCTTTAATGGAGGAAGCTGTAAATAGAGATGTTGTGATGAAGATTTTTGATCTGGCATTTCAAT GTGCAGCACCGGTCCGAGCAGATCGACCCGACATGAAATCGGTGGCAGAGCAATTGTGGACAATAAGGGCAGATTACCTGAAGAGTGCAAGGAGAGAATA ATTAGTGAAACTTGATGATGATGTTGATGATATTGTGAATCCAGTGCTGTTCTTTCTTTTCTTAAGCCTATCTAAACATGCTTGTCTTTCCAACATTATT ATGAAGTGAAGTTTATTTTTATAAGCTCTTCCTTTATCTGACTTTATTTATTCATAACTAACAACAGACTAAACAGCACGTGTTTTCCATAGTCAAGCAC GGTTTGTTCTAACTTCAAAGGTTTTATGTTTCTTTTCTTGTCTTGCCCGTGAAGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42352; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237709
| Blastp | Calmodulin-binding receptor-like cytoplasmic kinase 3 from Arabidopsis with 52.27% of identity |
|---|---|
| Blastx | Calmodulin-binding receptor-like cytoplasmic kinase 3 from Arabidopsis with 53.7% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT2G11520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464383.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |