Id Trinity | FTRINITY_DN54409_c1_g4_i1 |
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Name Transcript | Ll_transcript_237710 |
Sequence | TATATAAATACAAAAGTCACCTCTTTGTGTTCCTAAAAAAAAATGTACTCATTAGAAAAGCCACGTCCCATTGATTTCTACAAAGAAGAAGAAGAAAGCC CAGACATGATGATCGAAGTGGTCCCCACCACCGACAACAACAACCACCACCACCTCCAACAACCACCGCCACCACCACCGCTAATCCTGACCGAGAGCAG CGGCGAGGACCCAGAACTGGACCAAATGAAAGCCCCCAAAAAACGCGCGGAGACATGGGTCCAAGACGAGACGCGTAACCTAATATCCCTTCGTCGTGAA ATGGACGCGCTTTTCAACACTTCGAAATCGAACAAACACCTTTGGGAGCAGATTTCGGCGAAGATGAGGGACAAGGGTTTCGATCGTTCTCCAACTATGT GCACTGATAAATGGAGGAACTTGCTTAAGGAGTTCAAGAAAGCAAAGCACCAAGATAATAGAGGGAGTAGTAAGATGAGTTATTATAAAGAGATTGATGA GATTCTGAGAGAGAGGAGTTGTAAAACTCTGCATTATAAGACACCCACTCCTCCAACTCTTTCTAAAGTTGATTCCTTTATGCATTTTGCTGACAAAGGT ATTGAGGATGCTAGCATATCTTTTGGGCCTGTTGAAGCTAATGGGAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCA TTACCACAGCTGAAGCTGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCTGAGAATGGTGGGGAAAGTCAGTCATGTTGTGGAAGGGT TATATCGGTGAAATGGGGTGATTATACAAGACGTATTGGTATTGATGGCACTGCAGAAGCCATTAAGGAGGCAATTAGGTCTGCTTTTAGATTGAGAACT AGACGTGCATTTTGGTTGGAGGATGAAGACCGGGTAATCAGAAGTATTGATCGTGACATGCCTTTGGGAAGTTACACTCTTCACATTGATGAAGGTAATT TCACTATGTTTGTGTTCTTCTTGAAAGTTGAGACCTTTGAATTTGTTTAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_42353; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237710
Blastp | Trihelix transcription factor GT-1 from Arabidopsis with 67.15% of identity |
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Blastx | Trihelix transcription factor GT-1 from Arabidopsis with 65.7% of identity |
Eggnog | DNA binding protein GT-1(ENOG410XUBM) |
Kegg | Link to kegg annotations (AT1G13450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417472.1) |
Pfam | Myb/SANT-like DNA-binding domain (PF13837.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |