Ll_transcript_237284

• Id Trinity: FTRINITY_DN54416_c3_g1_i10
• Name Transcript: Ll_transcript_237284
• Sequence: ATGAAACCATGAAAACCTTATCGGATTGGTGCTAAAGGAATCAGAATTCAATTTCATCATCTTACTACTTTTGTATTCATCAATTTTCTTAGAACCTAAT TCCCCTTTTAATCATCTCCACACATTTATGAATTTGCCACAACGATGAATATTCTCTCTCCACCCCAACTTCACATAAACAAACCCTACCATTTCACCCA TCCCCATGGAACATTCAAGAAGCAATTCCATTCCAATCGTAACAGGAATGTTCTTCAACGCAGTTCACCATTCACAGTGCTATGCAACTCAAAACCCAAT GAAGATGATTTTGTGAGCAGGGTTTTGAAGGAGAACCCAAGCCAAGTGCAACCCAAGTTTCTAATTGGTGAAAAGTTCTATAATTTGAAAGAAAAACAGG ATTTTGGTAAAAAATCCAATGTGGGTATTTTTGATGTGTTGAAGAGGTTGAAGCCTCTGAGAAAGAGTGATAATGTGGAACAAAACAAGGACTTGGAAGA GAAGAAAGATTCTGTTTACTTGAAAGACTTGCTTAAAGAGTACAGAGGGAATCTTTATGTGCCGGAGCATATTTTCGGCACGAAATTGTCTGAAGAGGAA GAGTTTGATAAGAATCTAGACTCTTGTCCGAAAATGAGCATTGAGGAGTTTCTAAAGGCTTTGAGTAAAGACAAAATTAAGTTAATAACTTCAAAAGGAG ATAATGGGAGTTACTTTAGGGATTTTATTGTAGAGTTGAAGGAAATCCCGGGTGATAAAAGTTTGCATACAACTAAATGGGTTCTCAGGTTGGATAAAAA TGAAGCTCAAGCAATTTTGGAGGACTACACCGGGCCGCGATATGAGATAGAGAGGCACACTACGTCTTGGGTGGGAAAAATGCCAGAGTACCCTCATCCG GTTGCATCTTCCATATCTAGCAAAGTGATGGTTGAGCTAGCAGTAGTCACATTTTTTGTGGCTTCTGCAGCAATTCTAGTTGGTGGTTTCCTTGCAGCAG CAGTATTTGCTGCTACCAGTTTAATATTTGTGGCAACTGTATATGTCGCATGGCCTATAGCCAAACCATTTCTTAAGATTTTCCTTGGCATTGCTTTAGC AATTTTGGAGAGGATTTGGGATCATCTTGTTGATTTTTTCAGTGATGGTGGCATTTTCTCTAAGATATATGAGATTTACACTTTTGGTGGTATATCTTCC AGCCTCAAGGCATTGAGACCAATTATGCTTGTTGTTCTGACTATGGTACTTCTTGTTCGCTTCACTCTTTCAAGAAGACCTAAGAACTTCAGGAAGTGGG ATATCTGGCAGGGAATAGACTTCTCACGGTCAAAAGCTGAAGCTCGTGTTGATGGTTCAACTGGAGTTAAGTTTTGTGATGTTGCTGGAATTGATGAGGC AGTCGAGGAACTTCAAGAGTTGGTGAAATACCTAAAAACTCCTGAGCTATTTGATAAGATGGGGATCAAACCTCCACATGGTGTTCTTCTGGAGGGTCCT CCTGGATGTGGCAAGACCTTGGTAGCCAAGGCTATAGCTGGTGAAGCTGGTGTTCCATTTTACCAAATGGCTGGATCAGAATTTGTGGAAGTTTTAGTTG GTGTTGGTTCTGCACGTATTAGGGATTTATTTAAAAGAGCCAAGGTAAACAGACCATCAGTTATATTCATAGATGAAATTGATGCATTGGCAACTAGGCG TCAAGGTATTTTCAAGGACTCCGAAGATGAAATGTATAATGCAGCCACCCAGGAAAGAGAAACAACATTGAACCAATTGTTGATAGAGCTTGATGGTTTT GATACTGGAAAGGGTGTTATATTTCTAGCCGCCACGAATCGAAGAGATTTATTGGATCCTGCACTTCTTCGTCCAGGTCGCTTTGATCGCAAGATCAGGA TTCGCCCTCCAAGTGCAAAAGGAAGACATGATATTTTGAAAATTCATGCTAGCAAAGTAAAAATGTCGGAGACTGTTGATTTATCCAGCTATGCACAGAA TCTTCCAGGCTGGAGTGGAGCAAGATTGGCACAATTGGTCCAAGAGGCTGCTCTTGTTGCTGTCAGGAAACGGCATAACTCAATTCTTCAGTCAGATATG GATGATGCAGTTGACAGACTTACAATCGGACCTAAACGTGTTGGAATAGAATTAGGTTATCAAGGACAGTGTCGTAGAGCTACTACTGAAGTGGGAGTTG CAATAACGTATCATCTTCTCCGGCGATATGAAAATGCGATAGTAGAACGCTGTGATCGTATCTCAATAGTACCTCGTGGTCAGACATTATCTCAAGTGGT GTTTCATCGACTTGATGATGAATCATATATGTTTGAACGTCGACCACAGTTGCTGCATCGTCTTCAGGTTCTGCTTGGAGGTAGAGC
• Tissue: flowers
• Gene name: LI_gene_42417;
• Additional information: details;

Expression of Ll_transcript_237284

FPKM

• FPAB: 3.3
• FPNAB: 7.7
• LF1: 14.7
• LF2: 11.4
• LF3: 11.7
• LF4: 6.9
• UF1: 9.1
• UF2: 15.3
• UF3: 10.2
• UF4: 6.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237284

• Blastp: Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic from Arabidopsis with 73.35% of identity
• Blastx: Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic from Arabidopsis with 71.41% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT4G23940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423765.1)
• Pfam: AAA domain (dynein-related subfamily) (PF07728.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;