| Id Trinity | FTRINITY_DN54417_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_237472 |
| Sequence | TGGAGGGAAAGTTAGTTATTTAACAACCAAACTTTCCTTTCCCCCCTTTTATACACATTCCTAATTTTTGGTTTGCTAACACTCAACCATTACCTCCCAT GTTAAATGAAGAGATGGAGTTAGAGGTCACACCATAGGACATCATTGGAAAGAGGAAAGCTGCTCAAGGAAGTGTGGAAGTACTTGTCAAGTGGAAGGAC CTTCCCGAGCATGACAATACTTGGGAAGAAGTGAATGCCTTGCAACAAAAATTCTCAGCTTTTCAACTTGGGGACAAGTTGCTACTTTTAGGGGAGGGTA TTGATAAGGGTAGGCAGAAGCCATGTACAAAAAATGTATATAGAAGAGGCAAAAGGAATGTAGTTAATTTATAGTTGTCAAAAATACCCCTGGGTAGTTA GTAGCAGTTAGGAAACTATAAAAGAAATAGATGGGATCGGAATTAGTTAGTTAGTTCATTGAATTGATTTCTGGTTGTGGAACCAAGAAAGGGATCGTGG GATACAGGTTGTAAACACATACATTTCTTTCTCTATTCTTCAATAAAGCTTAGAACCCTAGAAGAATCAATTTGATTCTGGTTTAGGGGCATTTCTTTCA ATCTTCTATTCTTTGTGCTTAATTTATACCAGTGTTTAACAAAAGGTTTATTGACAAAATATAATATTGATATCAAAGTGCTGTGGATTTCTTAAAGGAT TTCTCTAGGATTGGTGGTGTAGCTTTACGACATATGATGTCTTTAGCCCTTTATGAAGCATCAAAGCACTATAATAATTATTTATCATGGTTGTTATAGA TGTTATGATTTGGTAAAATATGGGTCTCAGGTCGGTGGTAGTGTACCTATTAGTTCAAGAGCTCGGGAGATGGCTTCAATACTGGATACTGCTCTACTCC AAGCCTTCCTGCTTACTGGGCAAACTTCAGCGACTGAAGAATTACTGAAAGGTCTTAACTACTGTGATCTGAAAGTATGTGAAGAAATACTTCAGGAAGG CAGCTATCATGTTGCTTTACTAGAACTTTACAGTTGCAACTCAATGCACCGGGATGCTCTTGAACTTGTTCACAAATTGGTGGAAGAGTCAAAGTCTGGC CAATCTGAGATTAAGCATAAGTTCAAGCCTGAGACCATCATTGAATATCTCAAGCCGCTGTGTGGAACAGACCCCTTAGTTGTTTTAGAGTTCTCAATGC TTGTTCTTGAAAGCTGCCCAACCCAAACTATTGATCTCTTTCTGTCCGGAAATATTCCAGCAGATATGGTGAACTCATATTTAAAGCAACATGCTCCAAA CATGCAAGCCATGTACTTGGAGCTCATGCTTGCGATGAATGAGGATGCCATATCTGGAAATCTGCAAAATGAAATGGTAGACATCTATCTTTCCGAAGTA CTTGATTGGCAAGCGGATTTAAGTGCTCAAGGGAAATGGGACGAAAAAGCTTACTCCCCAAAGAGGAAAAAATTATTGTCGGCCTTGGATAATATATCAG GATACAATCCAGAGGCTCTTCTGAAACGTCTTCCACTAGATGCTTTATACGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTAGCATT ATCTTTGTATGTTCATAAGCTTCATGTTCCAGAACTGGCATTATCTTATTGTGACCGGGTGTATGAGTATATGCTCAAGCCTTCTGGAAAATCTCCAACT AACATATACCTATTGCTTCTGCAAATCTATATGAATCCACAAAGGACAACCAAGAGCCTTGAAAAGAGAATTACAAATCTATTATCCCCCCAGAAATCAA TGATTTCAAGGGTTGTCAGTTCAAAAAAATTACTAAAAACCAGAAGCCGAGGGTCTAAGAAAATCGCTGCAATAGAGTTTGCAGAGGACACAAAAGCTAA TTTGAGCAGCACTGATAGTGGCAAGAGTGACGCTGAGGAATTTATTGAGGAAGGAGGTGCTTCTATCATGCATGATGAGGTCCTAGATTTGTTGAGCCGT AGGTGGGATAGAATCAATGGAGCCCAGGCGCTTAAACTTTTACCTAGAGAGACTAAACTGCAGAATCTGATTCCATTTCTTGGACCCCTGCTGAGAAAAT CTAGTGAAATGTACCGTAATTGCTCAGTGGTTAAAAGCTTGAGACAGAGTGAGAACCTTCAGGTGAAAGATGAACTCTACAATAAGAGAAAAACAGTTGT GAAGATAACCGGTGATAACATGTGTTCTCTGTGCAATAAGAAAATAGGGGCTAGTGTTTTTGCAATCTACCCCAATGGGAAAACTCTAGTGCACTTCAAT TGTTTCAGGGATTCCCAAAGCATGAAAGCTGTAGCCAAAGGGTCTCCATTGAGGAAGCCATTTTGATTGAAAAGTGATATCAATTGGTGGTTCTGTGAGC ATTGCTTTACATACACATAGTAAGGTTGGTACTGTTAAAGTGTGATATTTGTCTGCAATATCAGTTTGTTCACTTGGACAATCTTATTCATTTGGAGTGC AGAAGGGGAGCCATTTTTTCTCTCATTTTCCCTCTTACTGTTGAGAAATAAGGTCACTATATAAATAATTGGAATCATTTAAAGATAGCTTCTTTAGCTT TTCTTTGCTTCTTTACTTGCATTATAGGTACTGATGAGGCAAATTTGAGATTTTCCCCAAGGTTTGAAATTTTATATAAATGCATTTCCCCTTGGATTCG TTGCATTTGGGTTCAGCTATCTCTAAACTAAATAGATAAGTTTTTCCATTGCTTTAGTCTCATTGATCACGTGTAATCAATTGATAGTTTTCTCTCTCTC AAGGGCACAAGTTGAGGAGAGAGAAACAAAGAGACTTTCTTAGATTTTGTGAAATTTCTCTATATTTCAAAGCTAAGAGCTCAATATTTGGTGATATAAA TAGTTGGTCCCAAAATTAGATAGAAGGTGGAGATTGTGTTAGACATTCTAAAGTTACTTAGTATCAAATTGTTGTCCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42427; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237472
| Blastp | Vam6/Vps39-like protein from Mus with 27.25% of identity |
|---|---|
| Blastx | Vam6/Vps39-like protein from Mus with 27.25% of identity |
| Eggnog | beta receptor associated protein 1(ENOG410XNSX) |
| Kegg | Link to kegg annotations (269338) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431559.1) |
| Pfam | Vacuolar sorting protein 39 domain 1 (PF10366.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |