| Id Trinity | FTRINITY_DN54417_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_237473 |
| Sequence | CAGCCATGCTAAAAATGGCCTCCGTTATTTCCATCTCCTTCTCCTTCAATCTCTATATTGAACCATTGAATTGCAACGATAGTTAAAGAAGAACGCATCA GAAAAAAAACGAACACAAACCAAAATGGTGCACAGCGCCTACGATTCCTTCGAGCTCCTCACTGATTGCCCTTCCAAGATCGAATCCATCGAATCCTACG GTTCCAAAATCCTCCTCGGCTGCTCCGACGGATCTCTCCGTATCTACGCGCCGTCGCAGCCTCCGCCGTTATCGCAACCGGAGGAGCTGAGGAAGGAGCC TTACGCGCTCGAGAGATGCGTGAGCGGCTTCGCGAAGAAGCCTCTCATTTCAATGCAGGTTGTGGAATCGAGGGAGCTGCTGTTGTCATTATCTGAATCC ATCGCGCTTCATAGGCTACCCAATTTTGAAGCTGTAGCGGTTATCACTAAGGCCAAAGGCGCCCATGTGTTTTGCTGGGACGAGGAAAGAGGGTTCTTGT GTTTCGCTAGGCAAAAACGGGTTTGTATTTTCAGACATGATGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCTGATGTGGTGAAGTCGAT GTGTTGGTGTGGTGATAATATATGCTTCGGGATTAGAAAGGAATATTTGATTTTAAATGCTGCAAATGGCGCATTATCTGAGGTTTTTACTTCTGGGAGA CTAGCACCCCCTTTAGTTGTCCCTGTTCCTTCTGGAGAACTGCTACTTGGGAAGGAGAACATTGGTGTATTTGTGGCTCAAAATGGGAAACTTCGTCCAG ATGGTAGGATTTGCTGGTCAGAGGCCCCAGCAGAAGTTGTAATGCAAAAGCCATATGCTATAGCACTACTGCCTAGATTTGTGGAGATTCGATCTCTCAG AGATCCATATTCACTGATACAAACAGTAGTTCTTCGAAATGTACGCCATCTTCGCCAAAGCAATAATTCTGTGATTCTTGCTTTAGATAATTCTATTCAT GGCCTCTTCCCAGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCCTCTGGCAACTTTGAAGAAGCCTTGTCATTGTGCAAAATCCTTCCACCTGAAG ATTCAAGTCTTCGTGCTGCAAAGGAGAGTTCAATTCACATAAGATATGCCCACTATCTTTTTGACAATGGCAGCTATGAAGAGGCAATGGAACATTTTCT GGCATCTCAAGTAGATATAACCCATGTGCTGTCTCTTTATCCATCAATTATCCTTCCAAAGACAACAACTATTGTTCATGACCAAGAGAAGTTGATGGAC ATTTATGGGGATTCTTTATATCTCTCCAGAGCTTCTTCGGGTGTATCAGATGATATGGAGTCCTCTTCAGGATCTCATTTGTCAGAACCTGATGAGAATG CAGCACTCGAGTCCAAAAAAATGAGCTATAATATTCTTATGGCTCTCATAAAGTTTTTGCAGAAGAAGAGGTACAGTGTTATTGAGAAGGCCACTGCAGA GGGAACCGAGGAAGTTGTTTTAGGCGCAGTAGAGGATAACATCTCATCCTATAATAGTAGTAGGTTTAAGAAACTAAACAAGGTCGGTGGTAGTGTACCT ATTAGTTCAAGAGCTCGGGAGATGGCTTCAATACTGGATACTGCTCTACTCCAAGCCTTCCTGCTTACTGGGCAAACTTCAGCGACTGAAGAATTACTGA AAGGTCTTAACTACTGTGATCTGAAAGTATGTGAAGAAATACTTCAGGAAGGCAGCTATCATGTTGCTTTACTAGAACTTTACAGTTGCAACTCAATGCA CCGGGATGCTCTTGAACTTGTTCACAAATTGGTGGAAGAGTCAAAGTCTGGCCAATCTGAGATTAAGCATAAGTTCAAGCCTGAGACCATCATTGAATAT CTCAAGCCGCTGTGTGGAACAGACCCCTTAGTTGTTTTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGCCCAACCCAAACTATTGATCTCTTTCTGTCCG GAAATATTCCAGCAGATATGGTGAACTCATATTTAAAGCAACATGCTCCAAACATGCAAGCCATGTACTTGGAGCTCATGCTTGCGATGAATGAGGATGC CATATCTGGAAATCTGCAAAATGAAATGGTAGACATCTATCTTTCCGAAGTACTTGATTGGCAAGCGGATTTAAGTGCTCAAGGGAAATGGGACGAAAAA GCTTACTCCCCAAAGAGGAAAAAATTATTGTCGGCCTTGGATAATATATCAGGATACAATCCAGAGGCTCTTCTGAAACGTCTTCCACTAGATGCTTTAT ACGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTAGCATTATCTTTGTATGTTCATAAGCTTCATGTTCCAGAACTGGCATTATCTTA TTGTGACCGGGTGTATGAGTATATGCTCAAGCCTTCTGGAAAATCTCCAACTAACATATACCTATTGCTTCTGCAAATCTATATGAATCCACAAAGGACA ACCAAGAGCCTTGAAAAGAGAATTACAAATCTATTATCCCCCCAGAAATCAATGATTTCAAGGGTTGTCAGTTCAAAAAAATTACTAAAAACCAGAAGCC GAGGGTCTAAGAAAATCGCTGCAATAGAGTTTGCAGAGGACACAAAAGCTAATTTGAGCAGCACTGATAGTGGCAAGAGTGACGCTGAGGAATTTATTGA GGAAGGAGGTGCTTCTATCATGCATGATGAGGTCCTAGATTTGTTGAGCCGTAGGTGGGATAGAATCAATGGAGCCCAGGCGCTTAAACTTTTACCTAGA GAGACTAAACTGCAGAATCTGATTCCATTTCTTGGACCCCTGCTGAGAAAATCTAGTGAAATGTACCGTAATTGCTCAGTGGTTAAAAGCTTGAGACAGA GTGAGAACCTTCAGGTGAAAGATGAACTCTACAATAAGAGAAAAACAGTTGTGAAGATAACCGGTGATAACATGTGTTCTCTGTGCAATAAGAAAATAGG GGCTAGTGTTTTTGCAATCTACCCCAATGGGAAAACTCTAGTGCACTTCAATTGTTTCAGGGATTCCCAAAGCATGAAAGCTGTAGCCAAAGGGTCTCCA TTGAGGAAGCCATTTTGATTGAAAAGTGATATCAATTGGTGGTTCTGTGAGCATTGCTTTACATACACATAGTAAGGTTGGTACTGTTAAAGTGTGATAT TTGTCTGCAATATCAGTTTGTTCACTTGGACAATCTTATTCATTTGGAGTGCAGAAGGGGAGCCATTTTTTCTCTCATTTTCCCTCTTACTGTTGAGAAA TAAGGTCACTATATAAATAATTGGAATCATTTAAAGATAGCTTCTTTAGCTTTTCTTTGTGTGAATTGGAAACTTCTCAAAAGAAAAGCTAAAGATAGCT TCTTTAGCTTTTCTTTGCTTCTTTACTTGCATTATAGGTACTGATGAGGCAAATTTGAGATTTTCCCCAAGGTTTGAAATTTTATATAAATGCATTTCCC CTTGGATTCGTTGCATTTGGGTTCAGCTATCTCTAAACTAAATAGATAAGTTTTTCCATTGCTTTAGTCTCATTGATCACGTGTAATCAATTGATAGTTT TCTCTCTCTCAAGGGCACAAGTTGAGGAGAGAGAAACAAAGAGACTTTCTTAGATTTTGTGAAATTTCTCTATATTTCAAAGCTAAGAGCTCAATATTTG GTGATATAAATAGTTGGTCCCAAAATTAGATAGAAGGTGGAGATTGTGTTAGACATTCTAAAGTTACTTAGTATCAAATTGTTGTCCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42427; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237473
| Blastp | Vam6/Vps39-like protein from Mus with 27.49% of identity |
|---|---|
| Blastx | Vam6/Vps39-like protein from Mus with 26.92% of identity |
| Eggnog | beta receptor associated protein 1(ENOG410XNSX) |
| Kegg | Link to kegg annotations (269338) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431559.1) |
| Pfam | CNH domain (PF00780.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |