| Id Trinity | FTRINITY_DN54420_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_238795 |
| Sequence | ATCTGAACAGGTATTCGTAGATTAAATTTTTGCATATTTACTTGTCATTTTTATTTTCTCCCGTCATTTACTTATAAAGAATTTACCTTTATCTTTATAC TTTCTCTTTTATTCCTCAATCTTCTGTCAAGGTTGATCTTTTTGTAGCTACCCCAAGTAATATTCCAGCTGAAAGTTTTGAAGCGTATGGTGTGGCAGTT GCTCTTGTTGCACAAGCCTTTGTAGGTAAAAAACCACATCTCATCCAAGATGCTGATAACTTATTCCAACAACTTCAACAAACTAAGGTAGCTACAATGA TGAATGCCACCTCTGTATATACTCCCAAGGAGAAGAGAGAGATTGATTTTGCTTTAGAAAGGGGACTCTGTGCACTGCTTGTTGGGAAGCTTGATGAGTG TCGCTCATGGTTGGGACTAGACAGTGAGAGCTCACCTTATAGAAACCCATCTATTATAGAATTTGTAATGGAAAATGCAAAGGGTGATGAAGACAGTGAT CTTCCTGGACTCTGTAAATTGTTGGAGACATGGTTGTTGGAGGTGGTTTTCCCCAGATTTAGAGATACTAAAGACATAACACTCACGCTTGGAGATTACT ATGATGATCCTACTGTACTAAGATATCTAGAGAAGCTAGAGGGTGTTGGTTACTCTCCCTTGGCAGCTGCAGCAGCCATAGCAAAAATTGGAGCTGAGGC TACTGCTGTTATAGGTCATGTCAGGGATAGTGTAATAAATGCATTGAAGAAGGTATTTCCTGCTGGTTCCGAAGATCAAATTGTGAAACAGCAAGAAAAT GTTGATAAAGATTATTTCAGTCTTTCTGAAAGTGAGAGTCCTGTAGTATTATCAGATCAAGATACATCGGCTAATGTTGAGGTTTCTGGAATACAAAATT CTACTGATATAAGTGGTAAATTTAGTACTGATGAAATTAAAGATGCAAGTGTGAAGATAATGTGTGCTGGTGTTGTAATTGGACTTGTGATTTTGGCTGG CCTTAAGTTTTTACCTGCTAGGAATGACACGTCTATCCTACGCAAAATGACTGGTTCAGCTGTGGCATCGGATACTATCAACTCAGGTTCCCTACAAGAG GATGAATTCAGAGAGCAGCTACCAAAAATGGATGCAAGGGTTGCAGAAGCTCTAGTTCAGAAATGGCAAAATATCAAATCCCAAGCTTTTGGACCTGACC ATTACCTAGGAAGATTGCAAGAGGTTTTGGATGGTGACATGTTGAAGATATGGACTGATCGCGCAGCTGAGATTGCAGAGCGTGGTTGGTCCTATGACTA CACTTTGGAGGAAGTCAACATTGATAGTGTGACAATATCGCAGAATGGGCGTCGTGCTCTGGTGGAAGCAACTCTCAAAGAGTCAACCCACCTCATTGCT GTAGGGCATCCACAACATGACACTTCAAACAGCAGAACCTACACCACAAGATATGAGATGAATTTTGCAGGTTCAGGTTGGAAAATTGTTGAAGGAGCTG TCCTTGAGTCATAATTTTATATTGTAACTCGTATATACATATCAGGCTATGACATGTTAATCAATCTAGATGCCACTCCTGTCATATGTACATTTTCAAG CACGTTATTTTTCATTGTGCATTTTCAAGCACGTTATTTTTCATTGTGCATTTTCATATGTACATTTTATAAATTGCGAAAGTAGGTTGAATTCTAAAGA GGGCTTATTTAATGTTAGATATCATAATGTATTTGATATGTCTTAATTATTACCAAGGTGTGAATTATGGATTCCAAAAACACTATTTCATGTGAACAAT TTTTTTTGGTTATAATGGATCGTATCTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42441; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238795
| Blastp | Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic from Arabidopsis with 52.52% of identity |
|---|---|
| Blastx | Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic from Arabidopsis with 53.93% of identity |
| Eggnog | DnaJ domain protein(ENOG410YJYY) |
| Kegg | Link to kegg annotations (AT5G42480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432110.1) |
| Pfam | Protein of unknown function (DUF4101) (PF13355.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |