Id Trinity | FTRINITY_DN54421_c1_g1_i1 |
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Name Transcript | Ll_transcript_239216 |
Sequence | GATATCTATGGCACTGTGGATTTCATTTTTGGCAATGCTGCTGTGGTTTTCCAAAAGTGTAACATCTATGCCAGAAAACCATTGCCAAACCAGAAGAATT CTATCACAGCACAAGGCCGAAATGATCCAAACCAAGTAACTGGAATTTCCATACAAAATTGCAAAATTAATGCTGCACCAGACTTGGCAGCAGAGATAAA TTCCACAGAAAACTACTTAGGTAGGCCATGGAAACAGTATTCAAGGACTGTGTACTTGCAATCATACATTGGAGATTTAATTCATCCTTTGGGTTGGTTA GAGTGGAATGGCACAGTTGGATTAGACACACTTTTTTTATGGTGAGTTCAAAAACCATGGACCAGGTGCTAATACCAAAAAAAGGGTTCAGTGGCATGGT TACAACCTGTTGAATGCTACACAAGCTTGGAACTTTACTGTCCTTAATTTTACCTTGGGTAATACATGGCTACCCAACACAGATATACCCTATACTGAAG GTCTACCGTAGATAACTGAATTTATATTGAAGTAATAAATTT BLAST |
Tissue | flowers |
Gene name | LI_gene_42449; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239216
Blastp | Probable pectinesterase/pectinesterase inhibitor 47 from Arabidopsis with 73.87% of identity |
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Blastx | Probable pectinesterase/pectinesterase inhibitor 47 from Arabidopsis with 73.87% of identity |
Eggnog | pectinesterase(COG4677) |
Kegg | Link to kegg annotations (AT5G04970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450515.1) |
Pfam | Pectinesterase (PF01095.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |