Ll_transcript_237622

• Id Trinity: FTRINITY_DN54422_c2_g1_i1
• Name Transcript: Ll_transcript_237622
• Sequence: CTGAGATTAGAAAGCACAAATTGAAAAGGACCAAACCCATTATCCACCACACACACTATCCTCATCTTATGAACAAAGTTGAAATTCCATGGCATGAAGG GAAATGAGTAGCAGTGAAGAAAATCAAGAATAAAAATGGTTCATCAGAGTCACATTCTCTCTTATAACGTTATTACACTCTCTTCTTTTTCTTATACTCC TCCAATACGACGTCGTTTCATTACAACCGCTGCTCCTCCTAGAACAACAACCAATCTCAGGCGTCTCACCTCTCGCATCGTTCAACTCACGCGCCGCAAA CAGCTTCGTCAGATATTGGAAGAGGTTGAGGATGCAAAGAGAGATTATGGGCGGGTGAACACAATAGTGATGAATGCAGTGATGGAGGCATGTGTTCGTT GCGGTGACATTGACTTAGCACTTAAGATATTTGATGAGATGAAAAGCCCACACCAGGGTTGTGGTGTCGATACTGTTACCTATGCCACACTTTTGAAGGG GTTAGGTGAGGCACGAAGAATCGATGAAGCTTTTCAATTGCTTGAATCTGTGGAAAATGGTATGGCCACAGGAAGCCCAAAGCTGTCAGCTGGATTGATC TTTGGCCTGCTAAATGCCTTAATTGAAGCTGGAGACTTGCGTCGTGCAAATGGCCTCCTTGCACGTTATGGTTTTGTCCTTCGTGAAGATGGCAATTTTT CAATCGCAGTATACAACTTACTAATGAAGGGGTATATAAAATCAGGCTGCCCGCACACTGCAATAAACATGATCACTGAAATACTACATGAAGGAATAAC GCCTGACAGGCTCACATATAATACACTAATTTTAGCATGCATGAAGAGTGGAAAGTTGGATACTGCAATGCAATTTTTTGAGGAAATGAAGGGAGAAGCA CAGAAATCCATTAATGATGATCTGGTTCCAGATATTGTCACATATACGACATTGCTCAAGGGTTTTGGCCAGGCAAAGGATCTTACTTCAGTTCTGAAAA TAGTGATGGAAATGAAATCATGTCATGAGTTGTACATTGATAGAACTGCTTACACTGCAATAGTTGATGCTTTACTGAAATGTGGCGCATTTATGGGTGC TCTGTGTATATTTGGAGAAATACTGAAGCTGTCTGGTTGGAGACCAGAATTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCCTTTGCTTTT GGAGGGGATTATGATCTAGTTAAAAAATTGTATAAACGGATTTGGCCAGATTCTGCAGGAACTATCTTACCAGTTGCCCAAGAAGAAGCTGATCACCTTC TCATGGAAGCAGCACTAAATGCCGGCCAGGTTGATGTTGCTATTAATACTCTTACCGGTATTATTTCAAGATGGAAGGGCATATCATGGACAAGTCGTGG AGGCCTGGTTGCTATGCGTATTGAAGCCATGTTGGGGTTCTCAAAGTCTGTATTCAGTCCTTTCTTACTTCCTGAGGTTTCACCTTCTGAACCGGTTGAG AGTTTCATGATACCATTTGAAGCAACACAGCCACTACAAGGTACCATAAAGCTGGAGAATGTGGCTGCCCGTTTCATTAATGATGCAGTTGTTCCAATTG TAGATGAGTGGGGCAGCTGTATCGGGATCTTGCACCGTGAAGACTGCAATCAGCTTGATGCATCAGTTTCAACAATGATGAGAAGCCCACCTCCTTGTGT AACAATTTCAACATCTGTTGGTCATGTAGTTGATTTAATTTTGGAGAAGAGGTACCCAATGGTCATCATTGTAAAATACACTGACTCATATGCTACTACT TCATACAGTTCTAGAGCTGTTGGAGTTTTTACATTACAACAATTGAATAGGCTTATAACACCTGTTTCTGTATCTGAATCAAAAGGGACACACATTTCTC TCCACCAAAGATAATAATATAATGTGTTTAGCTAATACCAAAATCTGGTTTTTGTTTTTTTGTGATAGTGATAAAGGAATTGATTTAAAAAGTATATATA AATTATGGCATTTAATTATTTTTC
• Tissue: flowers
• Gene name: LI_gene_42467;
• Additional information: details;

Expression of Ll_transcript_237622

FPKM

• FPAB: 2.1
• FPNAB: 3.6
• LF1: 4.7
• LF2: 5.2
• LF3: 5.5
• LF4: 4.7
• UF1: 3.6
• UF2: 5.9
• UF3: 5.4
• UF4: 5.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237622

• Blastp: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 61.25% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 62.48% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G10690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447517.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;