Ll_transcript_237629

• Id Trinity: FTRINITY_DN54422_c2_g1_i3
• Name Transcript: Ll_transcript_237629
• Sequence: CTGAGATTAGAAAGCACAAATTGAAAAGGACCAAACCCATTATCCACCACACACACTATCCTCATCTTATGAACAAAGTTGAAATTCCATGGCATGAAGG GAAATGAGTAGCAGTGAAGAAAATCAAGAATAAAAATGGTTCATCAGAGTCACATTCTCTCTTATAACGTTATTACACTCTCTTCTTTTTCTTATACTCC TCCAATACGACGTCGTTTCATTACAACCGCTGCTCCTCCTAGAACAACAACCAATCTCAGGCGTCTCACCTCTCGCATCGTTCAACTCACGCGCCGCAAA CAGCTTCGTCAGATATTGGAAGAGGTTGAGGATGCAAAGAGAGATTATGGGCGGGTGAACACAATAGTGATGAATGCAGTGATGGAGGCATGTGTTCGTT GCGGTGACATTGACTTAGCACTTAAGATATTTGATGAGATGAAAAGCCCACACCAGGGTTGTGGTGTCGATACTGTTACCTATGCCACACTTTTGAAGGG GTTAGGTGAGGCACGAAGAATCGATGAAGCTTTTCAATTGCTTGAATCTGTGGAAAATGGTATGGCCACAGGAAGCCCAAAGCTGTCAGCTGGATTGATC TTTGGCCTGCTAAATGCCTTAATTGAAGCTGGAGACTTGCGTCGTGCAAATGGCCTCCTTGCACGTTATGGTTTTGTCCTTCGTGAAGATGGCAATTTTT CAATCGCAGTATACAACTTACTAATGAAGGGGTATATAAAATCAGGCTGCCCGCACACTGCAATAAACATGATCACTGAAATACTACATGAAGGAATAAC GCCTGACAGGCTCACATATAATACACTAATTTTAGCATGCATGAAGAGTGGAAAGTTGGATACTGCAATGCAATTTTTTGAGGAAATGAAGGGAGAAGCA CAGAAATCCATTAATGATGATCTGGTTCCAGATATTGTCACATATACGACATTGCTCAAGGGTTTTGGCCAGGCAAAGGATCTTACTTCAGTTCTGAAAA TAGTGATGGAAATGAAATCATGTCATGAGTTGTACATTGATAGAACTGCTTACACTGCAATAGTTGATGCTTTACTGAAATGTGGCGCATTTATGGGTGT GCTGTTGTTTAATTTAAAGTTTCTTAGAAAATAAATAATATATGGACGTATGATAGTTGGAATAAGATATTTCTGAGGAATGCTAATACTGGTATTAAAG GGCTCTCACGGTCTATTGGATTGAAGAGTCAAATTTTGTTCAACTTCTGATGTGTATTTTGTTGTTAATGCCAATCTGTTCTTATTAAGCAATTATCTAG TTAGAGGTGAGAATTTTGTTTGTAACTTATGGTAATAGATGCTGAAGGCGTATTTCTTAACAAAAAAAAGTCAAACTGAAGCATAAGGCAACATAAAAAT TGGAGTCCTGTCCTTATAAGTATGTATATGTCACAAAGGAGAACTATTAAACTAAAAAAGGAAGAAAAAGCTACTTCTTTTCTTGATATTTGGAAAATGT CAGCCAGTCTGGCTTGATGGACTTATTTCAACTGCTAATGCTTTCTGCCATATAGTTTGGGTCAATATTCAATATTCTTCGCCTCTCTCATTCTTCTCCT AATTGAGTCATCTTTGGGAACTTAGGTGCTCTGTGTATATTTGGAGAAATACTGAAGCTGTCTGGTTGGAGACCAGAATTGAGGCCAAAGCCTCACCTCT ATCTTTCCATGATGCGTGCCTTTGCTTTTGGAGGGGATTATGATCTAGTTAAAAAATTGTATAAACGGATTTGGCCAGATTCTGCAGGAACTATCTTACC AGTTGCCCAAGAAGAAGCTGATCACCTTCTCATGGAAGCAGCACTAAATGCCGGCCAGGTTGATGTTGCTATTAATACTCTTACCGGTATTATTTCAAGA TGGAAGGGCATATCATGGACAAGTCGTGGAGGCCTGGTTGCTATGCGTATTGAAGCCATGTTGGGGTTCTCAAAGTCTGTATTCAGTCCTTTCTTACTTC CTGAGGTTTCACCTTCTGAACCGGTTGAGAGTTTCATGATACCATTTGAAGCAACACAGCCACTACAAGGTACCATAAAGCTGGAGAATGTGGCTGCCCG TTTCATTAATGATGCAGTTGTTCCAATTGTAGATGAGTGGGGCAGCTGTATCGGGATCTTGCACCGTGAAGACTGCAATCAGCTTGATGCATCAGTTTCA ACAATGATGAGAAGCCCACCTCCTTGTGTAACAATTTCAACATCTGTTGGTCATGTAGTTGATTTAATTTTGGAGAAGAGGTACCCAATGGTCATCATTG TAAAATACACTGACTCATATGCTACTACTTCATACAGTTCTAGAGCTGTTGGAGTTTTTACATTACAACAATTGAATAGGCTTATAACACCTGTTTCTGT ATCTGAATCAAAAGGGACACACATTTCTCTCCACCAAAGATAATAATATAATGTGTTTAGCTAATACCAAAATCTGGTTTTTGTTTTTTTGTGATAGTGA TAAAGGAATTGATTTAAAAAGTATATATAAATTATGGCATTTAATTATTTTTC
• Tissue: flowers
• Gene name: LI_gene_42467;
• Additional information: details;

Expression of Ll_transcript_237629

FPKM

• FPAB: 1
• FPNAB: 0.8
• LF1: 1.3
• LF2: 1.6
• LF3: 1.4
• LF4: 1.1
• UF1: 1.1
• UF2: 1.6
• UF3: 0.9
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237629

• Blastp: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 60% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 62.91% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G10690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447517.1)
• Pfam: CBS domain (PF00571.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;