| Id Trinity | FTRINITY_DN54422_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_237647 |
| Sequence | ATTTTTTTTTTTTTTTATACAACTTACTAATGAAGGTTTTGCTCTGATCCATGCTCTTGTAGGGGAGAAAGTTTCATTATGAGAAGCATGTTAAAGTATC TCGGATAGCTAATCGTAGCTGTAAACCTTGAGCGCTTTTTTTGTTTCGTTTTGAATTTAGGGGTATATAAAATCAGGCTGCCCGCACACTGCAATAAACA TGATCACTGAAATACTACATGAAGGAATAACGCCTGACAGGCTCACATATAATACACTAATTTTAGCATGCATGAAGAGTGGAAAGTTGGATACTGCAAT GCAATTTTTTGAGGAAATGAAGGGAGAAGCACAGAAATCCATTAATGATGATCTGGTTCCAGATATTGTCACATATACGACATTGCTCAAGGGTTTTGGC CAGGCAAAGGATCTTACTTCAGTTCTGAAAATAGTGATGGAAATGAAATCATGTCATGAGTTGTACATTGATAGAACTGCTTACACTGCAATAGTTGATG CTTTACTGAAATGTGGCGCATTTATGGGTGTGCTGTTGTTTAATTTAAAGTTTCTTAGAAAATAAATAATATATGGACGTATGATAGTTGGAATAAGATA TTTCTGAGGAATGCTAATACTGGTATTAAAGGGCTCTCACGGTCTATTGGATTGAAGAGTCAAATTTTGTTCAACTTCTGATGTGTATTTTGTTGTTAAT GCCAATCTGTTCTTATTAAGCAATTATCTAGTTAGAGGTGAGAATTTTGTTTGTAACTTATGGTAATAGATGCTGAAGGCGTATTTCTTAACAAAAAAAA GTCAAACTGAAGCATAAGGCAACATAAAAATTGGAGTCCTGTCCTTATAAGTATGTATATGTCACAAAGGAGAACTATTAAACTAAAAAAGGAAGAAAAA GCTACTTCTTTTCTTGATATTTGGAAAATGTCAGCCAGTCTGGCTTGATGGACTTATTTCAACTGCTAATGCTTTCTGCCATATAGTTTGGGTCAATATT CAATATTCTTCGCCTCTCTCATTCTTCTCCTAATTGAGTCATCTTTGGGAACTTAGGTGCTCTGTGTATATTTGGAGAAATACTGAAGCTGTCTGGTTGG AGACCAGAATTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCCTTTGCTTTTGGAGGGGATTATGATCTAGTTAAAAAATTGTATAAACGGA TTTGGCCAGATTCTGCAGGAACTATCTTACCAGTTGCCCAAGAAGAAGCTGATCACCTTCTCATGGAAGCAGCACTAAATGCCGGCCAGGTTGATGTTGC TATTAATACTCTTACCGGTATTATTTCAAGATGGAAGGGCATATCATGGACAAGTCGTGGAGGCCTGGTTGCTATGCGTATTGAAGCCATGTTGGGGTTC TCAAAGTCTGTATTCAGTCCTTTCTTACTTCCTGAGGTTTCACCTTCTGAACCGGTTGAGAGTTTCATGATACCATTTGAAGCAACACAGCCACTACAAG GTACCATAAAGCTGGAGAATGTGGCTGCCCGTTTCATTAATGATGCAGTTGTTCCAATTGTAGATGAGTGGGGCAGCTGTATCGGGATCTTGCACCGTGA AGACTGCAATCAGCTTGATGCATCAGTTTCAACAATGATGAGAAGCCCACCTCCTTGTGTAACAATTTCAACATCTGTTGGTCATGTAGTTGATTTAATT TTGGAGAAGAGGTACCCAATGGTCATCATTGTAAAATACACTGACTCATATGCTACTACTTCATACAGTTCTAGAGCTGTTGGAGTTTTTACATTACAAC AATTGAATAGGCTTATAACACCTGTTTCTGTATCTGAATCAAAAGGGACACACATTTCTCTCCACCAAAGATAATAATATAATGTGTTTAGCTAATACCA AAATCTGGTTTTTGTTTTTTTGTGATAGTGATAAAGGAATTGATTTAAAAAGTATATATAAATTATGGCATTTAATTATTTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42467; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237647
| Blastp | Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 60% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 62.06% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G10690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447517.1) |
| Pfam | CBS domain (PF00571.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |