| Id Trinity | FTRINITY_DN54425_c2_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_237504 |
| Sequence | GTGTGTAAGCAGAGCAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAAAGAGAGTGTAGGTAAACTAGTAGTAACGTCTTCTTACACA CAAACCCTAATTCAATTCAATTGAAGAAAAGAGGAAGTTTATTCTTCATTCATTCATTCATTCTTCATCCATCTTCATCATGTGGACCAATGTTTTCAAA ATTCCTGGTCTTCATCAGATATCATGGTTCCAATTCATGCCGCACGAACCTGACCTAAATCCTCCTCTACCTCTACCTGACAACAAAAGTGCAAAAGTGG ATGCTGCAATGTTACAAGTGCTTTCATCACATCTACAATTGCAGAAGGAAGGATTTCTCACTGCATGGACCAATTCCTTTGTCGGACCGTGGGACCCTTC TCAGGGTTTGCATAATCCTGATGAAAAGATCAAGCTCTGGCTTTTTATCCCTGGACGTCATTCATCGCTTCTTGACAATGCTCAACCTTTAGTATCCACA CTAAGAGTCGTTGCCTCTGGCCTCTGGCTGGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGGAATTGTATAGAAAGATCAC TTATTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAACTTCAAAGTGAAGAACTGTTCAGGAGGGGGCATCCGGCACTTGAGTT TGCCTTTGCTGCAAATGAGGAGGCAATCTTTATACATGTCATACTGTCCTCAAAGCATATCCGGATGCTTACCACAGGTGATCTGGAAAAAGTATTAAAA CATTCTACAGAGGCAACACATGGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTCACTGGTTGTTCTCCAAGTGATCTCGTCAAGCAAA GCTATTTCAGCAGTTCTGCCAAGGTCAAGGCATCGAATGGAATTGTAGGTCTCCCATATCATGTTCCCCAAGGTGTTGGTTGCAAGCTGAGGGGGCAGAA TTGTCATGTTGAAGTACGTCTTGGCTTCCCTAGACCTGGAACTGACAAGGCGTCACAGCAAAACAAAAATAATGTCAGGAATTTAACTAAGTTCAATGCT GCTGAATCTCTTGTTGTGGGACAAAGTGATCACAAGGGATCACCTAATCATTTGTCAGATTATGAGAAAACGTTTCTCTATCCAGCTGAGGCAGTGCTTG TGCCAGTTTTACAAACATCATTAGCAAGATCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCTTCCCTCCCTGGTTCCTTGTCCTTTATTCA CTGTGCTGGTAATTTGGATAATTCTGAAGATCCATGGACTGAAATAAATGGAACCCGCACTCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGC AGCATCAGTAGCTTAAGCGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCTGATGCTGATTCTTTAACATGTAGACAAT CGGTGCTATCTTCCGGTGATCAGTTGCAAAGTGATGGCCTCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAATCATTAAGCACAGCTACAAA TGTTATCGTGCAAGATGCATACATGTCTGATGTGGGTTCCATGGAAGTTAACAATTCAGCCATTACTGTAGGAAATGAGCCTATTGGGTCGTACTGGAAC TGGGATGATGATGATAGAGACCCAGTAATGGATATTGGAGCTCTTCTGTCTGAGTTTGGTGATTTTGGTGATTTTTTTGTAAATGATGTTTTGCCTTTTG GAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTTGTGTTTTCTGCACCGGATTGTGGAGATGTTAACAGCAGTCCAGTTGGAGTGATGGATGTTTCAGA TCAAACGCTTTTGCCTGTTGGATTTACTTCTTTTGAGAGCTTTAATCCACCTCCTTCAATAGCCATGGAGGAATGTCTCAGCAAAAATCAAGATAACTTG AATAACTCCATGTCATCGGTTCCAGTCAATCAAACTCAAATTTCATGTACACGGGAAGTTGAACATATAATGAAAGCTGAAGCAATGATGATATTTACTG CTGAATTTGGAGCCGTTGAGACCCCTACCAGTGATTTGTCCACATTATTCACGAGCCCATATTTTCCAAAATCTCGAAAAGCAGAGAGTTCAAATTCAAG TTCAAACAATTACTTGTATGGTGCAGCACCACCCTCTACTCCCTACATTGATGGATCAGAGGGGAAGAATGGTATGGTGGCCACTACAAAAACAATTTGT GGAAAACATGATGCAAGTACGAGTCTCCACCCCAGAAATTACTATAATTATGTGGAGAGTAGGAAGGACATAAATGACAGAAAACCAGCTAATTTAAATG ATAACGTCAACGGTAAATCTGAGGGGATGGTGCAACCTCTGTTCTCAAATATTGGTTCCAATGCTGTCACCAAGTCTGTTCTAAGGAAGATGAGTGAAGG CACACATGAGACGGAGCATTTCCTTCTCTCTGCAAAAACTTTGTTAGCGACTGATGTCACATGTGTTATGTTGCAAGCTTCCATGTGCAGGCTACGACAC ATTCTCTTATCTTCTAGTAACCTCATGCCTGTTGGTTTGAGCAGGTCAACTGGGGCTACATTTTTTAATCAGCTTCCTGGTGACCCAAGTACAACAACAG ACAACATATCCAATAAGTATGAGGTTAAGAAGAAAGAAAATATACCAGTTCGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGGCACCAGAACGC GCCTGTTGGTGTCTGGCGTACTGTAGGAGTTTCTAAAGTTGTAAAGTCTTCAAACTCGCCAAACATGGAAGTTGGTCCTTCCTTTTCTCATACTTCATTC AATGAAGATGGTATGCTTTCTTACAGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTCCTTTGCTTGTCCAACAAGCTATTTCCTTTGTTGATC TGGCCTTGGATGCGGATTGGGGTGATGGTCCTTATGGTTTGCTTGCATTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCGATGGTCCATGC TGGTTGTGGGGGAACTCTTGCTTCATCTCATTCGTTGGACATTGCTGGTGTCGAGTTACTGGACCCACTTTCTGCTGATGTCCATGCATCTACTGTGATC AGTTTGCTGCAGTCTGATGTAAAAACAGCTTTAAAGTCTGCATTTTCCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGCAAAGGACGCAATCAGT TGGTTGATGCTGGCAGCATAGTTGATGGTGTTTCTGCTGAGTCCAGCATTAGTGAATGTAGGGATTCCTCAGAACCAATGAGTCCATCCCAGTCATCTGT CGCTGGATCATCCATTATTAAGGGATCTAGCATGATGGATAGTGCTAAGGTGGATGAGATTTCCCAACGGAGAATTGGCCAAGATATATGCAGTTCAGAG TCAGAGCGGCAGCCATGTTCCCGGCTAAAACCTACCCTCACTGCTCTTCCATTTCCTTCTATACTCATGGGGTATCAGGATGATTGGCTCAAGACATCAG CAAACTGTCTACAGTACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATCACATATCATGTTGTATGTCCTGACATCGATCCTCTTAC CTCTGCCGCTGCTGATTTTTTTCAACAACTAGGAACTGTGTATGAGACATGCAAACTAGGTACTCATTCTCCACAAGTGTTGGGGAATCAGATGGAGATA GAGTCTGGGAAGTTGTCATCTAGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCCATGCGTCTCTTGTTGGTTCAATAAGTG ATTATTTTTTATCTTTATCTAATGGTTGGGATCTGACTAGTTATCTGAAGTCTCTTTCAAAGGCGCTTAGAGCTTTAAAACTTAGTTCTTGCCTTTCCAC AAACCCCACTGAAGGAAGCAACAGTTCATGCATGGTAATCTATGTGGTGTGCCCTTTTCCTGATCCTACTGCAATTTTGCAAACTGTAATTGAATCTTCC GTTGCCATTGGATCGGTTATCCAACAGTCAGATAGAGAGAAGAGATCTACCTTGCATAGTCAGGTTTTGAAGGCATTAAGTGGCTTGGCAACTGTTGATG AAGCTTCAGCATCTAATATCCTTGTCCTTTCTGGGTTTAGCATTCCAAAATTGGTCTTGCAGATAGTCACAGTTGATGCCATTTTCAGAGTCACAGGTCC ATCAGTTAGTGAGCTTGCCATTTTGAAAGAGACTGCCTTCACTGTTTACAGCAAGGCTCGTCGAATTTCACGGGGAATCTCTAGTGACTTTCCTCTATCA GCATTTTCAGGTAGGTCTCATTCTGTTTTGACACAAATGCCTTCTCCCATATCGGGGATGTGGAAAGACAGCGTTGGTCCTCGAATAGTAGGTCATTCTC TTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGTCTGGTGGGTGGGATAATTCTTGGCAACCAACGAGGAGTGCGGGATTGAACTGTGATCCAAGTAG ATCTGGGGATACTTTTTTTCACGATGAAATTAGGTACATGTTTGAACCCCTTTTTATTCTAGCAGAACCAGGTTCTCTAGATCATGGTACTTCTGTTATT GGTAGCCCCACTTCAGAATCTTCAAAAACATTGGGAGATGACAGTAGTGGTAGCTATATGCAGCAGAGTACAAGTACAGCTGGAAGCATGGATTCTGCTT CAAGCATTGATGGCTTAGGGTCTGATCAAAAGACTCCTCCGAGCCTACATTGTTGCTATGGATGGACCGAGGACTGGCGTTGGCTTGTATGCATCTGGAC AGATTCAAGGGGAGAACTGCTTGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACCAAGGGTCTGCAATGCCTATTTGCTCAAGTT CTTCAGCAAGGTTGTCTAATACTTCAATCTTGTGATACCAGTCTTGCAAAACCTCGAGATTTTGTGATAGCACGCATTGGTGGTTTCTACGAGCTTGAAT ACCTTGAGTGGCAAAAAGCCATCTATTCATTTGGTGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGGAAATATATGTCGGATGGGGTGTCCATAAC TAGTAATGGTTCTTCTTTACAACAACCAGAGATGAGTTTGATCCCAGAAAGAACTCTCCCTTCTTCACCTAGTCCTTTGTACAGCCCTCATACCAAAGCC ACTGGTTTTATGAAAGGCGGCAGTTTAGGGCAATCTGCTGTGAGAAAGCAGCATATGGGTGGACATTCTATGGTTGACAACAATTCAAGGGGTTTACTTC ATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCTATGGATCATACATTACAGCTTGTTCTCCCAGCTTCTGATTCATCTGGTTACACAGAAGGTTTTAC TCCAGTGAAGTCTCTTGGTTCTACGTCTTGCGCGTATGTTGTAATTCCTTCTCCTAGTATGAGGTTCCTTCCTCCAACAGCTCTTCAACTCCCGACATGC CTCACTGCAGAATCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTGTCCACAGGATTTGTGGTTTCAAAAGCAGTACCTTCCA TGAGGAAGGACCACAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATTGATTACTATGGAGTTGCTAATATCCGAGGAATTAA CAATAAGCAGCAAGGTGGTGGTAGAAGTTTAAGCTGGGAAACTAAAGATTTTGAAACAGAGACCCACTTGGTTCTGGAGACCCTTGCTGCAGAGCTTCAT GCTTTGTCATGGATGACTGTGAGCCCCACATACATAGAGCGGCGAACGTCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACT TTGCTGATAAAGAGCTATCTAAGAAGTCAGAGAAATCTTGACTACACCATATGCTATGATTAATACACTGCAATACTGCATCCTATCCTATCCATACATA TTAATTATATTGATCCTTTGTAAAATATTTGTAAAGCCTCTTCCTTGTGTGTTCCAGGAAGAAAGATTTAGCAGTTGTAGGGTATGACTGGAAATAGTTG AGAATGCATGTACATGAGTTGAGTTTTCTAGAGCAGCTGATTGTTAGCATTATTGATTTATTGATGAAAGCTGTTGATGGCACATAGGACTTTGACTATG GTTTTCTTGTAGAAAAGTGCATGAGAAAACCTTCAAGCAAGTCCATCTAGTAAGTAGAATGCAGCTAGGTGTGAGGGGATAATAAAATCTAATTATACTT GATTAACACTTTGTTGACACCTTATCTTTATTATAATAAAAATTTATGCTACTCGCACTTTTGTCGGGTGATGAGGAAATGATAAAACTTTTGAATCCTA AACCATGTTTCTTCACCTCAAATCTTAAGCAAAATGTTTTTAGCATTCTTCTAACACTAACACTCTGTTTGGTTTAAAGAGGACAATAGAAAGAAAGAAA ACGGAAGGAAAGAAAAAAGAAGGAATGAAAATAAGTAGAAAATAAGGTGAAAAGACTATTATAGCAACAATAATATAAAATGTATCTAATAAAATAGAAA TATTAAACACAATTGACATAATATCAATGAACATAAAATATATGACATTCAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42506; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237504
| Blastp | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.31% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.23% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT1G55325) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438261.1) |
| Pfam | Mediator complex subunit 13 C-terminal (PF06333.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |