Ll_transcript_237505

• Id Trinity: FTRINITY_DN54425_c2_g4_i6
• Name Transcript: Ll_transcript_237505
• Sequence: GTGTGTAAGCAGAGCAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGGAAGTAAACTAGTAGTAACGTCTTCTTACACACAAACCCTAA TTCAATTCAATTGAAGAAAAGAGGAAGTTTATTCTTCATTCATTCATTCATTCTTCATCCATCTTCATCATGTGGACCAATGTTTTCAAAATTCCTGGTC TTCATCAGATATCATGGTTCCAATTCATGCCGCACGAACCTGACCTAAATCCTCCTCTACCTCTACCTGACAACAAAAGTGCAAAAGTGGATGCTGCAAT GTTACAAGTGCTTTCATCACATCTACAATTGCAGAAGGAAGGATTTCTCACTGCATGGACCAATTCCTTTGTCGGACCGTGGGACCCTTCTCAGGGTTTG CATAATCCTGATGAAAAGATCAAGCTCTGGCTTTTTATCCCTGGACGTCATTCATCGCTTCTTGACAATGCTCAACCTTTAGTATCCACACTAAGAGTCG TTGCCTCTGGCCTCTGGCTGGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGGAATTGTATAGAAAGATCACTTATTGGGCT TTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAACTTCAAAGTGAAGAACTGTTCAGGAGGGGGCATCCGGCACTTGAGTTTGCCTTTGCT GCAAATGAGGAGGCAATCTTTATACATGTCATACTGTCCTCAAAGCATATCCGGATGCTTACCACAGGTGATCTGGAAAAAGTATTAAAACATTCTACAG AGGCAACACATGGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTCACTGGTTGTTCTCCAAGTGATCTCGTCAAGCAAAGCTATTTCAG CAGTTCTGCCAAGGTCAAGGCATCGAATGGAATTGTAGGTCTCCCATATCATGTTCCCCAAGGTGTTGGTTGCAAGCTGAGGGGGCAGAATTGTCATGTT GAAGTACGTCTTGGCTTCCCTAGACCTGGAACTGACAAGGCGTCACAGCAAAACAAAAATAATGTCAGGAATTTAACTAAGTTCAATGCTGCTGAATCTC TTGTTGTGGGACAAAGTGATCACAAGGGATCACCTAATCATTTGTCAGATTATGAGAAAACGTTTCTCTATCCAGCTGAGGCAGTGCTTGTGCCAGTTTT ACAAACATCATTAGCAAGATCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCTTCCCTCCCTGGTTCCTTGTCCTTTATTCACTGTGCTGGT AATTTGGATAATTCTGAAGATCCATGGACTGAAATAAATGGAACCCGCACTCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGCATCAGTA GCTTAAGCGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCTGATGCTGATTCTTTAACATGTAGACAATCGGTGCTATC TTCCGGTGATCAGTTGCAAAGTGATGGCCTCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAATCATTAAGCACAGCTACAAATGTTATCGTG CAAGATGCATACATGTCTGATGTGGGTTCCATGGAAGTTAACAATTCAGCCATTACTGTAGGAAATGAGCCTATTGGGTCGTACTGGAACTGGGATGATG ATGATAGAGACCCAGTAATGGATATTGGAGCTCTTCTGTCTGAGTTTGGTGATTTTGGTGATTTTTTTGTAAATGATGTTTTGCCTTTTGGAGAGCCCCC AGGAACTGCGGAATCTCAGGCACTTGTGTTTTCTGCACCGGATTGTGGAGATGTTAACAGCAGTCCAGTTGGAGTGATGGATGTTTCAGATCAAACGCTT TTGCCTGTTGGATTTACTTCTTTTGAGAGCTTTAATCCACCTCCTTCAATAGCCATGGAGGAATGTCTCAGCAAAAATCAAGATAACTTGAATAACTCCA TGTCATCGGTTCCAGTCAATCAAACTCAAATTTCATGTACACGGGAAGTTGAACATATAATGAAAGCTGAAGCAATGATGATATTTACTGCTGAATTTGG AGCCGTTGAGACCCCTACCAGTGATTTGTCCACATTATTCACGAGCCCATATTTTCCAAAATCTCGAAAAGCAGAGAGTTCAAATTCAAGTTCAAACAAT TACTTGTATGGTGCAGCACCACCCTCTACTCCCTACATTGATGGATCAGAGGGGAAGAATGGTATGGTGGCCACTACAAAAACAATTTGTGGAAAACATG ATGCAAGTACGAGTCTCCACCCCAGAAATTACTATAATTATGTGGAGAGTAGGAAGGACATAAATGACAGAAAACCAGCTAATTTAAATGATAACGTCAA CGGTAAATCTGAGGGGATGGTGCAACCTCTGTTCTCAAATATTGGTTCCAATGCTGTCACCAAGTCTGTTCTAAGGAAGATGAGTGAAGGCACACATGAG ACGGAGCATTTCCTTCTCTCTGCAAAAACTTTGTTAGCGACTGATGTCACATGTGTTATGTTGCAAGCTTCCATGTGCAGGCTACGACACATTCTCTTAT CTTCTAGTAACCTCATGCCTGTTGGTTTGAGCAGGTCAACTGGGGCTACATTTTTTAATCAGCTTCCTGGTGACCCAAGTACAACAACAGACAACATATC CAATAAGTATGAGGTTAAGAAGAAAGAAAATATACCAGTTCGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGGCACCAGAACGCGCCTGTTGGT GTCTGGCGTACTGTAGGAGTTTCTAAAGTTGTAAAGTCTTCAAACTCGCCAAACATGGAAGTTGGTCCTTCCTTTTCTCATACTTCATTCAATGAAGATG GTATGCTTTCTTACAGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTCCTTTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGA TGCGGATTGGGGTGATGGTCCTTATGGTTTGCTTGCATTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCGATGGTCCATGCTGGTTGTGGG GGAACTCTTGCTTCATCTCATTCGTTGGACATTGCTGGTGTCGAGTTACTGGACCCACTTTCTGCTGATGTCCATGCATCTACTGTGATCAGTTTGCTGC AGTCTGATGTAAAAACAGCTTTAAAGTCTGCATTTTCCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGCAAAGGACGCAATCAGTTGGTTGATGC TGGCAGCATAGTTGATGGTGTTTCTGCTGAGTCCAGCATTAGTGAATGTAGGGATTCCTCAGAACCAATGAGTCCATCCCAGTCATCTGTCGCTGGATCA TCCATTATTAAGGGATCTAGCATGATGGATAGTGCTAAGGTGGATGAGATTTCCCAACGGAGAATTGGCCAAGATATATGCAGTTCAGAGTCAGAGCGGC AGCCATGTTCCCGGCTAAAACCTACCCTCACTGCTCTTCCATTTCCTTCTATACTCATGGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTGTCT ACAGTACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATCACATATCATGTTGTATGTCCTGACATCGATCCTCTTACCTCTGCCGCT GCTGATTTTTTTCAACAACTAGGAACTGTGTATGAGACATGCAAACTAGGTACTCATTCTCCACAAGTGTTGGGGAATCAGATGGAGATAGAGTCTGGGA AGTTGTCATCTAGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCCATGCGTCTCTTGTTGGTTCAATAAGTGATTATTTTTT ATCTTTATCTAATGGTTGGGATCTGACTAGTTATCTGAAGTCTCTTTCAAAGGCGCTTAGAGCTTTAAAACTTAGTTCTTGCCTTTCCACAAACCCCACT GAAGGAAGCAACAGTTCATGCATGGTAATCTATGTGGTGTGCCCTTTTCCTGATCCTACTGCAATTTTGCAAACTGTAATTGAATCTTCCGTTGCCATTG GATCGGTTATCCAACAGTCAGATAGAGAGAAGAGATCTACCTTGCATAGTCAGGTTTTGAAGGCATTAAGTGGCTTGGCAACTGTTGATGAAGCTTCAGC ATCTAATATCCTTGTCCTTTCTGGGTTTAGCATTCCAAAATTGGTCTTGCAGATAGTCACAGTTGATGCCATTTTCAGAGTCACAGGTCCATCAGTTAGT GAGCTTGCCATTTTGAAAGAGACTGCCTTCACTGTTTACAGCAAGGCTCGTCGAATTTCACGGGGAATCTCTAGTGACTTTCCTCTATCAGCATTTTCAG GTAGGTCTCATTCTGTTTTGACACAAATGCCTTCTCCCATATCGGGGATGTGGAAAGACAGCGTTGGTCCTCGAATAGTAGGTCATTCTCTTCCAAGAGA GGGTGACATTGATGCTAGCTTGAGGTCTGGTGGGTGGGATAATTCTTGGCAACCAACGAGGAGTGCGGGATTGAACTGTGATCCAAGTAGATCTGGGGAT ACTTTTTTTCACGATGAAATTAGGTACATGTTTGAACCCCTTTTTATTCTAGCAGAACCAGGTTCTCTAGATCATGGTACTTCTGTTATTGGTAGCCCCA CTTCAGAATCTTCAAAAACATTGGGAGATGACAGTAGTGGTAGCTATATGCAGCAGAGTACAAGTACAGCTGGAAGCATGGATTCTGCTTCAAGCATTGA TGGCTTAGGGTCTGATCAAAAGACTCCTCCGAGCCTACATTGTTGCTATGGATGGACCGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAGG GGAGAACTGCTTGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACCAAGGGTCTGCAATGCCTATTTGCTCAAGTTCTTCAGCAAG GTTGTCTAATACTTCAATCTTGTGATACCAGTCTTGCAAAACCTCGAGATTTTGTGATAGCACGCATTGGTGGTTTCTACGAGCTTGAATACCTTGAGTG GCAAAAAGCCATCTATTCATTTGGTGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGGAAATATATGTCGGATGGGGTGTCCATAACTAGTAATGGT TCTTCTTTACAACAACCAGAGATGAGTTTGATCCCAGAAAGAACTCTCCCTTCTTCACCTAGTCCTTTGTACAGCCCTCATACCAAAGCCACTGGTTTTA TGAAAGGCGGCAGTTTAGGGCAATCTGCTGTGAGAAAGCAGCATATGGGTGGACATTCTATGGTTGACAACAATTCAAGGGGTTTACTTCATTGGGCACA AAGCATTAGTTTTGTTGCAGTTTCTATGGATCATACATTACAGCTTGTTCTCCCAGCTTCTGATTCATCTGGTTACACAGAAGGTTTTACTCCAGTGAAG TCTCTTGGTTCTACGTCTTGCGCGTATGTTGTAATTCCTTCTCCTAGTATGAGGTTCCTTCCTCCAACAGCTCTTCAACTCCCGACATGCCTCACTGCAG AATCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTGTCCACAGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGA CCACAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATTGATTACTATGGAGTTGCTAATATCCGAGGAATTAACAATAAGCAG CAAGGTGGTGGTAGAAGTTTAAGCTGGGAAACTAAAGATTTTGAAACAGAGACCCACTTGGTTCTGGAGACCCTTGCTGCAGAGCTTCATGCTTTGTCAT GGATGACTGTGAGCCCCACATACATAGAGCGGCGAACGTCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCTGATAA AGAGCTATCTAAGAAGTCAGAGAAATCTTGACTACACCATATGCTATGATTAATACACTGCAATACTGCATCCTATCCTATCCATACATATTAATTATAT TGATCCTTTGTAAAATATTTGTAAAGCCTCTTCCTTGTGTGTTCCAGGAAGAAAGATTTAGCAGTTGTAGGGTATGACTGGAAATAGTTGAGAATGCATG TACATGAGTTGAGTTTTCTAGAGCAGCTGATTGTTAGCATTATTGATTTATTGATGAAAGCTGTTGATGGCACATAGGACTTTGACTATGGTTTTCTTGT AGAAAAGTGCATGAGAAAACCTTCAAGCAAGTCCATCTAGTAAGTAGAATGCAGCTAGGTGTGAGGGGATAATAAAATCTAATTATACTTGATTAACACT TTGTTGACACCTTATCTTTATTATAATAAAAATTTATGCTACTCGCACTTTTGTCGGGTGATGAGGAAATGATAAAACTTTTGAATCCTAAACCATGTTT CTTCACCTCAAATCTTAAGCAAAATGTTTTTAGCATTCTTCTAACACTAACACTCTGTTTGGTTTAAAGAGGACAATAGAAAGAAAGAAAACGGAAGGAA AGAAAAAAGAAGGAATGAAAATAAGTAGAAAATAAGGTGAAAAGACTATTATAGCAACAATAATATAAAATGTATCTAATAAAATAGAAATATTAAACAC AATTGACATAATATCAATGAACATAAAATATATGACATTCAAA
• Tissue: flowers
• Gene name: LI_gene_42506;
• Additional information: details;

Expression of Ll_transcript_237505

FPKM

• FPAB: 8.1
• FPNAB: 7.9
• LF1: 7.7
• LF2: 7.6
• LF3: 8.4
• LF4: 6
• UF1: 5.6
• UF2: 7.7
• UF3: 8.7
• UF4: 6.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237505

• Blastp: Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.31% of identity
• Blastx: Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.23% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT1G55325)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438261.1)
• Pfam: Mediator complex subunit 13 C-terminal (PF06333.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;