| Id Trinity | FTRINITY_DN54426_c2_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_237739 |
| Sequence | ATTCCAAATCAGATTCTCTCTCTTCACCAACAATTTCTATATAACCCTTTCCCTCAGATTTTGTATACTATCTTTCTCATTTCTCAATTATTGAACTTTA TCACATCCAAAATTTAATTTTTTAGGGTTCTTCAAAGTCCCAATTAGAATCAACTTGCTTTGTCCATTGATTAAAGATCAAAGTTTGAAACTTTATAGCC AAACAAATTCTGGGTCGCTGTGAATTTCTCATAAAAATTTCTGATTTTGAAGATTTTTGAAACAATGGCTGTTGTAGCTGCTTCTGGTGTTGTTGGTGGA AATGGGTGTTCTTCTTCTTGGATGAAATTCAAAGGAAGAAATGAAAGGAATAACAAAGTGAATAGGGTTAAGATTTTATGCTCTTATTCTTCTTCTTCTT CTGTTATGGATCCTTATAAGACATTAAGGATTCAACCTGATGCTTCTGAATCTGATGTTAGGAAAGCTTTTAGAGAACTTGCTTTGAAGTACCATCCAGA TGTATGCAGAGGGAGTAATTGTGGGGTGCAGTTTCACGAAATCAATGAGGCTTATGATGTTGTAATGGCTAATTTAAGAGGAGAATCAAATGAGACACAA GTGTATGAAGAAGCATATGATGCAGGAATTGATGAGCCATTAAGGGGAATGAATGATCCAGATTGGGACATGTGGGAAGAATGGATGGGTTGGGAAGGAG CAGGAATTCGTGACTATTCATCTCACATTAATCCTTACATTTGAAATTTGTCTAAATTATTAGTCGGAAAATGACATATTCTCCTACGCTAATAATGCTC GTATTAGCTCTACCAATCAATTATTGTGCATTGGGTATAGAGAACTTTGGTCCAATTGTACCCACCAAAACAAAGTGGTTGGTGTTCTTTGTAAATAGTC CATGTGAATATAATAATTTCCCTCTTCATAATTGAAATTGAGGGAGTGACTCTTTGAGTCTTTGTTAATTCTTATTGTTTTAATAATACTTTGCACACAA ATAAAATAAGCTCATAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42519; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237739
| Blastp | Chaperone protein dnaJ 8, chloroplastic from Arabidopsis with 57.76% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 8, chloroplastic from Arabidopsis with 67.57% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G80920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456351.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |