Ll_transcript_236507

Id TrinityFTRINITY_DN54430_c3_g1_i5
Name TranscriptLl_transcript_236507
SequenceTATTAACTATCAATTTTAGATAAATCTAATAATTTATTTGTATTGGTTGATTTAAACTATTAGATTTCGGTATATATATTTGGTTCCCTTTAGCAGCAGC AGCAATCCCTCCGAAAACTCCATCACTTTGTGTTGTTGGTGATGAATAGAAGAAGAAGAACAAGCATCTCCATCTCCATCTCCTCCTATCTCCATTCCTA TCTCCATTCCTATCTCCATTCCTATCTCCATTCCTTTCATCAGTTTCTGAAAAGAACAAGAAGCATCTCCTTCTCTTCAACCCTTACTCCCACAAGACCT TTCCCTGATTACTCCCCAAGGAAGCCTTCCATCAAAGACACCCAATTCGTCAACCAACTCACCACCACCATCAAGCTTCTCCGACCCGGCATTCTTCGCC GTGTTCTCAAACCCTATCACTCCTCCTTCAAACCAGATCACCTCATCTGGGTCCTAATGGATATCAAATATCACTATCATCTTCTTTTCGATTTCTTCCA TTGGGCTCACCTTCGCAGGGACCCTACATTGGAAGCACTCTGCATTCTTATTCACATTTCTGTTGCCTCTTCCCACCTTGCAATGGCGCATAACCTTCTT TTCCACTATTGGGATGCCAAAAAATTCAACCTTTTTCTTCATGATTTCGACAATTTTACTCATACATTGATTTATACTTATAAGTATTGGGGTTCTGACC CCAACGTCTTTGATCTTTTTTTCCAGGTGCTTGTTCAGGCTGGCTTCTTTCTAGAGGCAACAAAACTTTTTCATAAGTTGTTGCCTTATGGTGTTCTTCT CTCTCTACATTCTTGTAATTTCTTATTGACTAGCTTGTCTAATCATTTCGATGGTATCAAAATGGCGATGACTGTGTTCAATGAGTTTCCGGAAGTGGGT GTTTGTTGGAATACCATGTCTTATAATATTATTCTTCATTGTCTTTGTCAATTGGGGAAGATAAGGGAAGCACATAATCTGCTTATACAGATGGAGTTTA AGGGAATTGTTACCGATGTTGTGAGTTATGGTACTGTAATTACCGGATATTGTCGAATTGGAGAGTTAGGGAAGGTGTTGAAACTCATGGAGGAGTTGCA GAGAAAGGGATTGAAACCAAATAAGTATATTTATAATAACATAATTTCACTTCTTTGTAAAGATGGTGCAGTAGTTGAAGCGGAGCGAGTCTTTAAGGAG ATGAGAAGCCATCGGGTTTTCCCGGATAGTGTAGTTTATACCACTCTCATTAGTGGTTTCTGCAAGTGTGGGAATGTGTTGGCTGCGAACAAGATGTTTG ATGAAATGAGGCGTAAGAAAATAGTGCCTGATTTTGTGGCATATACTTCAATGCTTCATGGGTTTTGTCAAACCGGAAAAGTGGTAGAAGCACGCGGACT GTTTGCTGAAATGCTTAATAGAGGTTTGGAACCGGATGAAGTTACTTATACTACCCTCATTGACGGATATTGCAAGGCAGGGGAAATGAAAGAGGCATTT TCTCTTCACAACCAGATGGTTCATAAGGGTTTAACTCCAAACATTGTCACTTATACAGCATTAGTCGATGGCTTGTGTAAGCAGGGAGAGGTAGATGTAG CGAACGAGCTTCTTCATGAAATGGCTGGCAAGGGCCTTCAACCAAACATCTACACTTACAATACACTTATCAACGGTCTTTGTAAGATAGGAAATATAGT CCAAGCCGTAAAAATTATGGAAGAAATGGATATGGCAGGGTTTTATCCTGACACTATTACATACACTACGCTCATGGATGCTTACTGTAAGATGGGTGAA ATGGCCAAGGCTCATGAGCTGCTGCGGACTATGCTCGGTAAAGGACTTCAGCCTACGATTGTTACACTCAATGTGCTAATGAATGGGTTTTGCATGTCGG GGATGTTGGAAGACGGTGAGAGACTAATCAAATGGATGTTGGAGAAGGGTGTAAAGCCCAATGCGACAACATTCAATTCTCTTATGAAGCAGTATTGCAT TAGAAATGATATGCGTGCCACCACTGATATTTATAAAGGGATGCATTCTCAAGGAGTGATGCCTGATAAAAACACGTACAATATCTTGATCAAAGGGCAT TGTAAAGCCAGAAATATGAAAGAGGCATGGTTTTTACATAAAGAAATGGTTGAGAAGGGATTTAGTCTTACGGCTGCTACCTATAATGCTCTTGTTAAAG GTTTCTATAAAAGGAAGAAATTTGCGGAGGCTAGGAAGCTGTTTGAGGAGATGAGAATGCAAGGGTTTGTTGCAGAGAAAGAGATATATGATATTTTTGT TGACGTAAACTATGACGAAGGGAACTGGGAGACTACACTTGAGCTTTGTGATGAAGCAATAGAGAAATACCTTGTCGAGAAAACTTAGTTGAATTTTGTG TATGTCAGTATGACGGAAATGTCGGGGGAAGTAAGTTCTGTTTGTGTCTGCTTCTTTCGTGGCTCTTCCTTGCAAGTAACCTTGCTGATTTGTAAAATAA CAAATAATATACTTGTACATAATTTAGTTGTTCTAAATAGCAGACCCAGTGGGATTAAGGCTTCGTTCTTCTTCTTCCGGTGGCTTTATTTCTTTCTTCT TTGCATCTAACAAGATTTATGATTAGTTATGTATGGTTTTCTAAAATTTGTTTTGTACCGGAATACTAAGAATTTTTATGATGCTAGCGTATGCACTTCT TTATATCCATCTTGACAGCCTCACTGGTAACCTTTTCTATCTTAGTTGTATACTGTGATCATGTTTCTAACAGTGGTCCAGATGCTTGAAGAACACAGAC TTTGTGGTGATGAAATAGGCTCAACTTTCATTTGCCTATGGAGCTATGGCTATCATAAAGGCAGAGGAAAAGTCAAGTATGAACGGTTCTCAACCCAAGA AATAGATTTGTTGTACTGTATACTTACTCTGCTCCATCATGATGAACAGCCATATCCTTTAATTCATTTCTTAACTCATTTGTTGTGTCTTGTTTTGGCA GGTTTTTATTCTGACTATGTTTACCCTTATCACACTGTACTCCACAATTATCCCCATTTCACTATATGTGTCTATAGAGATGATAAAATTTATTCAGTCA ACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCATTGGCCAGAACATCAAATTTGAATGAAGAACTTGGGCAGGTGG AATACATTTTCTCTGACAAAACTGGGACTCTAACAAGAAACTT BLAST
Tissueflowers
Gene nameLI_gene_42588; 
Additional informationdetails; 

Expression of Ll_transcript_236507

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_236507
BlastpPentatricopeptide repeat-containing protein At1g05670, mitochondrial from Arabidopsis with 59.47% of identity
BlastxPentatricopeptide repeat-containing protein At1g05670, mitochondrial from Arabidopsis with 59.89% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G05670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431017.1)
PfamPPR repeat (PF12854.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;