| Id Trinity | FTRINITY_DN54430_c3_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_236509 |
| Sequence | CAATGAGTTTCCGGAAGTGGTGTTTGTTGGAATACCATGTCTTATAATATTATTCTTCATTGTCTTTGTCAATTGGGGAAGATAAGGGAAGCACATAATC TGCTTATACAGATGGAGTTTAAGGGAATTGTTACCGATGTTGTGAGTTATGGTACTGTAATTACCGGATATTGTCGAATTGGAGAGTTAGGGAAGGTGTT GAAACTCATGGAGGAGTTGCAGAGAAAGGGATTGAAACCAAATAAGTATATTTATAATAACATAATTTCACTTCTTTGTAAAGATGGTGCAGTAGTTGAA GCGGAGCGAGTCTTTAAGGAGATGAGAAGCCATCGGGTTTTCCCGGATAGTGTAGTTTATACCACTCTCATTAGTGGTTTCTGCAAGTGTGGGAATGTGT TGGCTGCGAACAAGATGTTTGATGAAATGAGGCGTAAGAAAATAGTGCCTGATTTTGTGGCATATACTTCAATGCTTCATGGGTTTTGTCAAACCGGAAA AGTGGTAGAAGCACGCGGACTGTTTGCTGAAATGCTTAATAGAGGTTTGGAACCGGATGAAGTTACTTATACTACCCTCATTGACGGATATTGCAAGGCA GGGGAAATGAAAGAGGCATTTTCTCTTCACAACCAGATGGTTCATAAGGGTTTAACTCCAAACATTGTCACTTATACAGCATTAGTCGATGGCTTGTGTA AGCAGGGAGAGGTAGATGTAGCGAACGAGCTTCTTCATGAAATGGCTGGCAAGGGCCTTCAACCAAACATCTACACTTACAATACACTTATCAACGGTCT TTGTAAGATAGGAAATATAGTCCAAGCCGTAAAAATTATGGAAGAAATGGATATGGCAGGGTTTTATCCTGACACTATTACATACACTACGCTCATGGAT GCTTACTGTAAGATGGGTGAAATGGCCAAGGCTCATGAGCTGCTGCGGACTATGCTCGGTAAAGGACTTCAGCCTACGATTGTTACACTCAATGTGCTAA TGAATGGGTTTTGCATGTCGGGGATGTTGGAAGACGGTGAGAGACTAATCAAATGGATGTTGGAGAAGGGTGTAAAGCCCAATGCGACAACATTCAATTC TCTTATGAAGCAGTATTGCATTAGAAATGATATGCGTGCCACCACTGATATTTATAAAGGGATGCATTCTCAAGGAGTGATGCCTGATAAAAACACGTAC AATATCTTGATCAAAGGGCATTGTAAAGCCAGAAATATGAAAGAGGCATGGTTTTTACATAAAGAAATGGTTGAGAAGGGATTTAGTCTTACGGCTGCTA CCTATAATGCTCTTGTTAAAGGTTTCTATAAAAGGAAGAAATTTGCGGAGGCTAGGAAGCTGTTTGAGGAGATGAGAATGCAAGGGTTTGTTGCAGAGAA AGAGATATATGATATTTTTGTTGACGTAAACTATGACGAAGGGAACTGGGAGACTACACTTGAGCTTTGTGATGAAGCAATAGAGAAATACCTTGTCGAG AAAACTTAGTTGAATTTTGTGTTGTCAGTATGACGGAAATGTCGGGGGAAGTAAGTTCTGTTTGTGTCTGCTTCTTTCGTGGCTCTTCCTTGCAAGTAAC CTTGCTGATTTGTAAAATAACAAATAATATACTTGTACATAATTTAGTTGTTCTAAATAGCAGACCCAGTGGGATTAAGGCTTCGTTCTTCTTCTTCCGG TGGCTTTATTTCTTTCTTCTTTGCATCTAACAAGATTTATGATTAGTTATGTATGGTTTTCTAAAATTTGTTTTGTACCGGAATACTAAGAATTTTTATG ATGCTAGCGTATGCACTTCTTTATATCCATCTTGACAGCCTCACTGGTAACCTTTTCTATCTTAGTTGTATACTGTGATCATGTTTCTAACAGTGGTCCA GATGCTTGAAGAACACAGACTTTGTGGTGATGAAATAGGCTCAACTTTCATTTGCCTATGGAGCTATGGCTATCATAAAGGCAGAGGAAAAGTCAAGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42588; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_236509
| Blastp | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial from Arabidopsis with 61.89% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial from Arabidopsis with 62.02% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT1G05670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431017.1) |
| Pfam | PPR repeat family (PF13041.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |